RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 GALTP07902 379 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 GSTA2P09210 222 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 RBP3P10745 1247 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 TCF4P15884 667 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 L1CAMP32004 1257 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 MLH1P40692 756 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 MAGEA6P43360 314 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CLCNKBP51801 687 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 SLC18A1P54219 525 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 HDAC4P56524 1084 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 EIF3EP60228 445 aaKnown RBP11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PPP2R2AP63151 447 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CDK16Q00536 496 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 OTUD4Q01804 1114 aaKnown RBP11.06□□□□□ -0.64
CDCA3-201ENST00000229265 MTA1Q13330 715 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 KRT81Q14533 505 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 P3H1Q32P28 736 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 KRT71Q3SY84 523 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 TIGD5Q53EQ6 642 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 TXNRD3NBQ6F5E7 133 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CD300LGQ6UXG3 332 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PAQR9Q6ZVX9 377 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CYP4V2Q6ZWL3 525 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CYS1Q717R9 158 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PLD5Q8N7P1 536 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 ATG4AQ8WYN0 398 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 LRRC39Q96DD0 335 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 SMARCD1Q96GM5 515 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CEP295NLQ96MC4 621 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 EPB41L4BQ9H329 900 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PLEKHA4Q9H4M7 779 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PCDH18Q9HCL0 1135 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 FAM49BQ9NUQ9 324 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 PCSK1NQ9UHG2 260 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 GGA2Q9UJY4 613 aa11.06□□□□□ -0.64
CDCA3-201ENST00000229265 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 E7ESA3 106 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 CHADO15335 359 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 RGS16O15492 202 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 HOXA2O43364 376 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 LILRB3O75022 631 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 CDH16O75309 829 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 GCATO75600 419 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 OAZ2O95190 189 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 EPCAMP16422 314 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SP100P23497 879 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ADORA2BP29275 332 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 PHBP35232 272 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ARL4AP40617 200 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 MDH1P40925 334 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 MAGEA4P43358 317 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 LMAN1P49257 510 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 RGS7P49802 495 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ARL4CP56559 192 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ZNF33AQ06730 810 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SCAPQ12770 1279 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 GPS1Q13098 491 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ORC1Q13415 861 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ARL13BQ3SXY8 428 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 KCNT1Q5JUK3 1230 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SPOUT1Q5T280 376 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 RNASEH2BQ5TBB1 312 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SCYL2Q6P3W7 929 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 GLB1LQ6UWU2 654 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 CLEC20AQ6ZU45 233 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 OSTM1Q86WC4 334 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 DCP1BQ8IZD4 617 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SIX6OS1Q8N1H7 587 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 EFHBQ8N7U6 833 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 MCUQ8NE86 351 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 URGCPQ8TCY9 931 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 HSPH1Q92598 858 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 FUBP3Q96I24 572 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 RBM15Q96T37 977 aaKnown RBP eCLIP11.05□□□□□ -0.646e-7■■□□□ 12.6
CDCA3-201ENST00000229265 TCF25Q9BQ70 676 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 LRFN3Q9BTN0 628 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 B3GNT5Q9BYG0 378 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 LMAN2LQ9H0V9 348 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 ZBP1Q9H171 429 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 DPEP3Q9H4B8 488 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 TLR9Q9NR96 1032 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 SENP1Q9P0U3 644 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 FZD10Q9ULW2 581 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 USP15Q9Y4E8 981 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
CDCA3-201ENST00000229265 USP3Q9Y6I4 520 aa11.05□□□□□ -0.64
CDCA3-201ENST00000229265 NOTCH4Q99466 2003 aa11.04□□□□□ -0.64
CDCA3-201ENST00000229265 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
CDCA3-201ENST00000229265 C5orf60A6NFR6 353 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms