RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 DCUN1D1Q96GG9 259 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 MPHOSPH6Q99547 160 aaKnown RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 SENP6Q9GZR1 1112 aaPredicted RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 FAM192AQ9GZU8 254 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 PPME1Q9Y570 386 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.684e-8■■■■■ 119.4
DDX11-201ENST00000228264 WDR27A2RRH5 827 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 PLOD2O00469 737 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 EGFRP00533 1210 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 HDCP19113 662 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 ZNF132P52740 706 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 IRF9Q00978 393 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 PLOD1Q02809 727 aaPredicted RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 GBE1Q04446 702 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 SNAPC2Q13487 334 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 ITGA9Q13797 1035 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 PDE1CQ14123 709 aaPredicted RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 SH2D4BQ5SQS7 431 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
DDX11-201ENST00000228264 THNSL1Q8IYQ7 743 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 CXCL16Q9H2A7 254 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 USP18Q9UMW8 372 aa10.78□□□□□ -0.68
DDX11-201ENST00000228264 B4GALT5O43286 388 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 TBC1D12O60347 775 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 USP12O75317 370 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 CRTAMO95727 393 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 CHRNGP07510 517 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 SERPINA6P08185 405 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 SNRPAP09012 282 aaKnown RBP10.77□□□□□ -0.69
DDX11-201ENST00000228264 SLC1A6P48664 564 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 CHN2P52757 468 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 DMPKQ09013 629 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 HNRNPDQ14103 355 aaKnown RBP10.77□□□□□ -0.69
DDX11-201ENST00000228264 PCLAFQ15004 111 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 PRAMEF18Q5VWM3 479 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 SAMD3Q8N6K7 520 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
DDX11-201ENST00000228264 C7orf26Q96N11 449 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 LENG8Q96PV6 779 aaPredicted RBP10.77□□□□□ -0.69
DDX11-201ENST00000228264 WWP1Q9H0M0 922 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 WDR37Q9Y2I8 494 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 CROCCQ5TZA2 2017 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 ZNF195O14628 629 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 HNRNPCP07910 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
DDX11-201ENST00000228264 ETFBP38117 255 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 THOP1P52888 689 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 EMP3P54852 163 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 CASC4Q6P4E1 433 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 TRIM72Q6ZMU5 477 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 KRT27Q7Z3Y8 459 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 SPATA6LQ8N4H0 392 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 TMCO5AQ8N6Q1 288 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 NTPCRQ9BSD7 190 aaKnown RBP10.77□□□□□ -0.69
DDX11-201ENST00000228264 B3GNT5Q9BYG0 378 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 FOXP3Q9BZS1 431 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 TRIP11Q15643 1979 aa10.77□□□□□ -0.69
DDX11-201ENST00000228264 XPO1O14980 1071 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 P4HA1P13674 534 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 PTGER2P43116 358 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 ALDH1A3P47895 512 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 COPAP53621 1224 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 SESN2P58004 480 aaPredicted RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 ROR1Q01973 937 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 R3HDM1Q15032 1099 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 VPS72Q15906 364 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 PGM2L1Q6PCE3 622 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 ZNF677Q86XU0 584 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 WDR75Q8IWA0 830 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 PLD5Q8N7P1 536 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 LENG1Q96BZ8 264 aaPredicted RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 PDLIM7Q9NR12 457 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 MCF2LO15068 1137 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 DKC1O60832 514 aaKnown RBP eCLIP10.76□□□□□ -0.69
DDX11-201ENST00000228264 FBXO21O94952 628 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 ATG7O95352 703 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 LTFP02788 710 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 ICAM1P05362 532 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 ERVK-10P10266 1014 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 CYP3A5P20815 502 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 HMGB2P26583 209 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 EPHA3P29320 983 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 FDFT1P37268 417 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 CLDN10P78369 228 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 HPCAP84074 193 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 CTBSQ01459 385 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 GRM2Q14416 872 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 PDPK2PQ6A1A2 396 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 RPS27LQ71UM5 84 aaKnown RBP10.76□□□□□ -0.69
DDX11-201ENST00000228264 FAM160B2Q86V87 743 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 XYLT1Q86Y38 959 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 LRRC71Q8N4P6 559 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 SLC45A3Q96JT2 553 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 KLHL32Q96NJ5 620 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 R3HDMLQ9H3Y0 253 aa10.76□□□□□ -0.69
DDX11-201ENST00000228264 K7ERI5 159 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms