RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FAM163BP0C2L3 166 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 PYGBP11216 843 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 CYBAP13498 195 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 YWHAZP63104 245 aaKnown RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 SLC26A11Q86WA9 606 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 KIRREL3Q8IZU9 778 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 CFAP61Q8NHU2 1237 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 PPP1R10Q96QC0 940 aaKnown RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 TRPV2Q9Y5S1 764 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 GSTA2P09210 222 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 TFE3P19532 575 aaPredicted RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 CDK16Q00536 496 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 ZNF618Q5T7W0 954 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 TTC39BQ5VTQ0 682 aaPredicted RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 KCNV2Q8TDN2 545 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 BTBD10Q9BSF8 475 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 UPF3AQ9H1J1 476 aaKnown RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 ARL8BQ9NVJ2 186 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 ZNF180Q9UJW8 692 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 TTLL3Q9Y4R7 772 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 CDY2AQ9Y6F7 541 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 FAM155AB1AL88 458 aaPredicted RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 LIN7AO14910 233 aaPredicted RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 AVILO75366 819 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 GCATO75600 419 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 TAF11Q15544 211 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 CMPK2Q5EBM0 449 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 GNASQ5JWF2 1037 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 PRPF39Q86UA1 669 aaKnown RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 PSTKQ8IV42 348 aaKnown RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 VPS52Q8N1B4 723 aa22.92■■□□□ 1.26
CCDC9-201ENST00000221922 NAF1Q96HR8 494 aaKnown RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 CADM1Q9BY67 442 aaKnown RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 RCOR3Q9P2K3 495 aaPredicted RBP22.92■■□□□ 1.26
CCDC9-201ENST00000221922 TRDMT1O14717 391 aaKnown RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 LUC7L3O95232 432 aaKnown RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 LMNAP02545 664 aaKnown RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 APRTP07741 180 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 MATKP42679 507 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 SERPINB4P48594 390 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 KRT72Q14CN4 511 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 C4orf50Q6ZRC1 276 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 RSPH3Q86UC2 560 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 NSL1Q96IY1 281 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 QKIQ96PU8 341 aaKnown RBP eCLIP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 CSPG4P5Q96PW8 444 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 KCTD15Q96SI1 283 aaPredicted RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 HNRNPABQ99729 332 aaKnown RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 TMEM120AQ9BXJ8 343 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 TPSB2P20231 275 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 BGNP21810 368 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 TPSAB1Q15661 275 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 FAM91A1Q658Y4 838 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 B3GALNT2Q8NCR0 500 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 TTC8Q8TAM2 541 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 CCDC110Q8TBZ0 833 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 TTC17Q96AE7 1141 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 CFAP36Q96G28 342 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 DCLRE1BQ9H816 532 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 POPDC2Q9HBU9 364 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 MTMR10Q9NXD2 777 aa22.91■■□□□ 1.26
CCDC9-201ENST00000221922 ZC3H7BQ9UGR2 993 aaKnown RBP22.91■■□□□ 1.26
CCDC9-201ENST00000221922 ENTPD5O75356 428 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 PRKCHP24723 683 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 SERPINB3P29508 390 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 ARL4AP40617 200 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 NKX3-2P78367 333 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 NBPF20Q3BBV1 942 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 SLC25A52Q3SY17 297 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 MFSD14CQ5VZR4 134 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 OSTM1Q86WC4 334 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.9■■□□□ 1.26
CCDC9-201ENST00000221922 APBB2Q92870 758 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 SRPK1Q96SB4 655 aaKnown RBP22.9■■□□□ 1.26
CCDC9-201ENST00000221922 DUSP16Q9BY84 665 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 SLC38A7Q9NVC3 462 aa22.9■■□□□ 1.26
CCDC9-201ENST00000221922 HACD1B0YJ81 288 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 DAB1O75553 588 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 MAP3K6O95382 1288 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 ATXN1P54253 815 aaKnown RBP22.89■■□□□ 1.26
CCDC9-201ENST00000221922 GBE1Q04446 702 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 BLMHQ13867 455 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 SYCP2LQ5T4T6 812 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 CAND1Q86VP6 1230 aaKnown RBP22.89■■□□□ 1.26
CCDC9-201ENST00000221922 PLAC1Q9HBJ0 212 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 CHST12Q9NRB3 414 aa22.89■■□□□ 1.26
CCDC9-201ENST00000221922 TRIM49D1C9J1S8 452 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 COPEO14579 308 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 GSC2O15499 205 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 CA12O43570 354 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 KRT37O76014 449 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 RPLP2P05387 115 aaKnown RBP22.89■■□□□ 1.25
CCDC9-201ENST00000221922 SNRPAP09012 282 aaKnown RBP22.89■■□□□ 1.25
CCDC9-201ENST00000221922 FAXCQ5TGI0 409 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 HEATR6Q6AI08 1181 aaKnown RBP22.89■■□□□ 1.25
CCDC9-201ENST00000221922 GDF6Q6KF10 455 aaPredicted RBP22.89■■□□□ 1.25
CCDC9-201ENST00000221922 KCNT2Q6UVM3 1135 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 CXCL17Q6UXB2 119 aa22.89■■□□□ 1.25
CCDC9-201ENST00000221922 PIGZQ86VD9 579 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms