RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SLC26A7Q8TE54 656 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 ROPN1BQ9BZX4 212 aaPredicted RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 ROPN1Q9HAT0 212 aaPredicted RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 NINJ2Q9NZG7 142 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 LRCH1Q9Y2L9 728 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 PCDHA3Q9Y5H8 950 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 F8VP50 259 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 GRIN3BO60391 1043 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 DNAJC6O75061 913 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 BANF1O75531 89 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 CETPP11597 493 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 NCKAP1LP55160 1127 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 ZBTB41Q5SVQ8 909 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 KLC3Q6P597 504 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 UNC5DQ6UXZ4 953 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 SYDE1Q6ZW31 735 aaPredicted RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 SGCDQ92629 289 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 CENPKQ9BS16 269 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 C10orf88Q9H8K7 445 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 GBA2Q9HCG7 927 aaPredicted RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 NDE1Q9NXR1 346 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 CLIC5Q9NZA1 410 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 XPO7Q9UIA9 1087 aaKnown RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
VPS18-201ENST00000220509 PPP2R3BQ9Y5P8 575 aa10.89□□□□□ -0.67
VPS18-201ENST00000220509 APOL1O14791 398 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 CCDC22O60826 627 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 GM2AP17900 193 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ADCYAP1R1P41586 468 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 TMPRSS15P98073 1019 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 MGAT5Q09328 741 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ZACNQ401N2 412 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 MFSD7Q6UXD7 560 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 DGLUCYQ7Z3D6 616 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ST13P4Q8IZP2 240 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 ACTL9Q8TC94 416 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 HELQQ8TDG4 1101 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 GRAMD1AQ96CP6 724 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ZBED3Q96IU2 234 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 MRPL9Q9BYD2 267 aaKnown RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 TXNRD2Q9NNW7 524 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 CCDC78A2IDD5 438 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 B4GALT5O43286 388 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 LYPLA2O95372 231 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 SLC4A1P02730 911 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ZSCAN5DPP0CG00 497 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 OTUD4Q01804 1114 aaKnown RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 METTL21CQ5VZV1 264 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 NXNQ6DKJ4 435 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 TMEM151BQ8IW70 566 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 RASGEF1CQ8N431 466 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ATXN7L3BQ96GX2 97 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 EPB41L4BQ9H329 900 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 SIX2Q9NPC8 291 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 SAE1Q9UBE0 346 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 STAP1Q9ULZ2 295 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 CES2O00748 559 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 PSTPIP1O43586 416 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 PGM3O95394 542 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 MOCS2O96007 188 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 GPD1P21695 349 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ADRA1DP25100 572 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ADORA2AP29274 412 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ALDH18A1P54886 795 aaKnown RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 CENPCQ03188 943 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 PRAMEF19Q5SWL8 479 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ZPBP2Q6X784 338 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 APPL2Q8NEU8 664 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 RNF139Q8WU17 664 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 CLPTM1LQ96KA5 538 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 ZNF560Q96MR9 790 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 FANCFQ9NPI8 374 aa10.88□□□□□ -0.67
VPS18-201ENST00000220509 CCDC177Q9NQR7 707 aaPredicted RBP10.88□□□□□ -0.67
VPS18-201ENST00000220509 GLTPD2A6NH11 291 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 ACKR2O00590 384 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 CXCL11O14625 94 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 LMNAP02545 664 aaKnown RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 ITGA2BP08514 1039 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 PTPN4P29074 926 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 ETV3P41162 512 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 RPL7AP62424 266 aaKnown RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 KLHL38Q2WGJ6 581 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 DCAF6Q58WW2 860 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 TFDP3Q5H9I0 405 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 EEF1DP3Q658K8 133 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 DUS1LQ6P1R4 473 aaKnown RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 LRRC8BQ6P9F7 803 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 ABHD15Q6UXT9 468 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 CCDC81Q6ZN84 652 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 UTP4Q969X6 686 aaKnown RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 DACT3Q96B18 629 aaPredicted RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 DNAJC1Q96KC8 554 aaKnown RBP10.87□□□□□ -0.67
VPS18-201ENST00000220509 TNIP3Q96KP6 325 aa10.87□□□□□ -0.67
VPS18-201ENST00000220509 NSMCE3Q96MG7 304 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms