RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 HTRA1Q92743 480 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 ITPKCQ96DU7 683 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 C7orf26Q96N11 449 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 NT5C1BQ96P26 610 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 CBWD1Q9BRT8 395 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 RNPEPQ9H4A4 650 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 NOL11Q9H8H0 719 aaKnown RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 PPCSQ9HAB8 311 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 TRIM39Q9HCM9 518 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.08■□□□□ 04e-8■■■■□ 19.8
PTPRA-201ENST00000216877 SHOC2Q9UQ13 582 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 PLLPQ9Y342 182 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 FIS1Q9Y3D6 152 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 BTAF1O14981 1849 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 PLSCR1O15162 318 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 HSPA4LO95757 839 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 KLRK1P26718 216 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 TCP10Q12799 353 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 FSCBQ5H9T9 825 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 KCNT1Q5JUK3 1230 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 TTC39BQ5VTQ0 682 aaPredicted RBP15.07■□□□□ 0
PTPRA-201ENST00000216877 SLC4A11Q8NBS3 891 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 TBC1D15Q8TC07 691 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.07■□□□□ 0
PTPRA-201ENST00000216877 DSEQ9UL01 958 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 GPSM3Q9Y4H4 160 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 IL23RQ5VWK5 629 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 OFCC1Q8IZS5 231 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 ATXN7L3BQ96GX2 97 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 STN1Q9H668 368 aaKnown RBP15.07■□□□□ 0
PTPRA-201ENST00000216877 VPS45Q9NRW7 570 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 ZNHIT2Q9UHR6 403 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 AKAP11Q9UKA4 1901 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 CNTNAP2Q9UHC6 1331 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 C7orf72A4D263 438 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 CCRL2O00421 344 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 SLITRK3O94933 977 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 KCNA2P16389 499 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 SCNN1DP51172 638 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 UBXN2AP68543 259 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 GTF2IP78347 998 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 IGDCC3Q8IVU1 814 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 KREMEN1Q96MU8 473 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 TBC1D14Q9P2M4 693 aa15.07■□□□□ 0
PTPRA-201ENST00000216877 USP17L10C9JJH3 530 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 RNASEH2AO75792 299 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 AMHP03971 560 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 CLK3P49761 638 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 FAM209AQ5JX71 171 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 WDR45BQ5MNZ6 344 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 RC3H1Q5TC82 1133 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 CADM3Q8N126 398 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 DEPDC4Q8N2C3 294 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 KYQ8NBH2 561 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 ACTL9Q8TC94 416 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 FAF2Q96CS3 445 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 RCN3Q96D15 328 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 RANBP9Q96S59 729 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 HGH1Q9BTY7 390 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 NCKIPSDQ9NZQ3 722 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 PROSCO94903 275 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 TMEM191BP0C7N4 346 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 SERPINB1P30740 379 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 GDF10P55107 478 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 ZBED5Q49AG3 693 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 RWDD4Q6NW29 188 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 SLC26A11Q86WA9 606 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 TTC30AQ86WT1 665 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 PCDH20Q8N6Y1 951 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 SSU72Q9NP77 194 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 TOPORSQ9NS56 1045 aaPredicted RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 ITGA11Q9UKX5 1188 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 SQORQ9Y6N5 450 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 H3BNH8 94 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 DDX5P17844 614 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 BCL2A1Q16548 175 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 IGFN1Q86VF2 1251 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 C11orf74Q86VG3 221 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 ZC3H7BQ9UGR2 993 aaKnown RBP15.06■□□□□ 0
PTPRA-201ENST00000216877 ERVK-11Q9UQG0 969 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
PTPRA-201ENST00000216877 CCDC88AQ3V6T2 1871 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 SPAG6O75602 509 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 FGRP09769 529 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 CDK8P49336 464 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 IST1P53990 364 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 PSMC5P62195 406 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 MS4A2Q01362 244 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 CES4AQ5XG92 561 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 MCOLN2Q8IZK6 566 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 CHPT1Q8WUD6 406 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 LRRN4Q8WUT4 740 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 CPT1BQ92523 772 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 FAR2Q96K12 515 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 CALN1Q9BXU9 219 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 KIAA1522Q9P206 1035 aaPredicted RBP15.05■□□□□ 0
PTPRA-201ENST00000216877 PI4KBQ9UBF8 816 aa15.05■□□□□ 0
PTPRA-201ENST00000216877 NOCTQ9UK39 431 aaKnown RBP15.05■□□□□ 0
PTPRA-201ENST00000216877 KIAA1551Q9HCM1 1747 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms