RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ZCCHC9Q8N567 271 aaKnown RBP20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 CADM4Q8NFZ8 388 aa20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 DDI1Q8WTU0 396 aa20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 SIPA1Q96FS4 1042 aa20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 CIPCQ9C0C6 399 aa20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 TSPAN16Q9UKR8 245 aa20.59■□□□□ 0.89
SYNGR1-201ENST00000216155 ZFYVE26Q68DK2 2539 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 A0A1B0GTW7 788 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 XPO1O14980 1071 aaKnown RBP20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 ZNF202O95125 648 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 IGLV3-19P01714 112 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 HOXD9P28356 352 aaPredicted RBP20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 BCAT1P54687 386 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 SLC8A3P57103 927 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 PDE4CQ08493 712 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 FMNL3Q8IVF7 1028 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 PRCCQ92733 491 aaPredicted RBP20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 SLC2A11Q9BYW1 496 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 ZDHHC5Q9C0B5 715 aa20.58■□□□□ 0.89
SYNGR1-201ENST00000216155 FAM221BA6H8Z2 402 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 CETN3O15182 167 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 STX10O60499 249 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 OXTRP30559 389 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 ADIGQ0VDE8 80 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 CUL2Q13617 745 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 TRIP6Q15654 476 aaKnown RBP20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 DCAF17Q5H9S7 520 aaPredicted RBP20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 SERPINA13PQ6UXR4 307 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 MIR1-1HGQ9H1L0 117 aa20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 OLA1Q9NTK5 396 aaKnown RBP20.57■□□□□ 0.88
SYNGR1-201ENST00000216155 EPHX1P07099 455 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 HLA-FP30511 346 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 RDXP35241 583 aaKnown RBP20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 BST2Q10589 180 aaKnown RBP20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 E2F5Q15329 346 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 TCERG1LQ5VWI1 586 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 SCAND2PQ9GZW5 306 aaPredicted RBP20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 LRRC4Q9HBW1 653 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 SFMBT1Q9UHJ3 866 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 COQ4Q9Y3A0 265 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 CACNA1GO43497 2377 aa20.56■□□□□ 0.88
SYNGR1-201ENST00000216155 METTL12A8MUP2 240 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 FTH1P19P0C7X4 201 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 ACADMP11310 421 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 HLA-EP13747 358 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 HARS2P49590 506 aaKnown RBP20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 MPPE1Q53F39 396 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 SGO2Q562F6 1265 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 ZC3H3Q8IXZ2 948 aaKnown RBP20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 OR2T3Q8NH03 318 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 EDEM1Q92611 657 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 IL21RQ9HBE5 538 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 GDPD2Q9HCC8 539 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 STOML2Q9UJZ1 356 aa20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 HBS1LQ9Y450 684 aaKnown RBP20.55■□□□□ 0.88
SYNGR1-201ENST00000216155 NUMA1Q14980 2115 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 YJEFN3A6XGL0 299 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 E7ENQ6 273 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 BCAT2O15382 392 aaPredicted RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 SLC16A3O15427 465 aaKnown RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 MSI1O43347 362 aaKnown RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 TIMM44O43615 452 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 TSPAN3O60637 253 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 CBFA2T3O75081 653 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 CD19P15391 556 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 PRCPP42785 496 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 BNC1Q01954 994 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 ARID5AQ03989 594 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 PNOCQ13519 176 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 CAMK2GQ13555 558 aaPredicted RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 BSPRYQ5W0U4 402 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 UBR7Q8N806 425 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 CYB5D2Q8WUJ1 264 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 ADAMTS14Q8WXS8 1223 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 IPO9Q96P70 1041 aaKnown RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 TMEM245Q9H330 911 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 HESX1Q9UBX0 185 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 EIF2B4Q9UI10 523 aaKnown RBP20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 PCOLCE2Q9UKZ9 415 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 PCDHB9Q9Y5E1 797 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 SLCO1B1Q9Y6L6 691 aa20.54■□□□□ 0.88
SYNGR1-201ENST00000216155 CELSR3Q9NYQ7 3312 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 O00370 1275 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 CAPNS1P04632 268 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 C7P10643 843 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 SGSHP51688 502 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 PMS1P54277 932 aaKnown RBP20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 ZNF445P59923 1031 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 PKDCCQ504Y2 493 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 FAM124AQ86V42 546 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 SIX6OS1Q8N1H7 587 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 ZNF366Q8N895 744 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 PNPLA1Q8N8W4 532 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 C1orf216Q8TAB5 229 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 UBA3Q8TBC4 463 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 WFIKKN2Q8TEU8 576 aa20.53■□□□□ 0.88
SYNGR1-201ENST00000216155 RNF139Q8WU17 664 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms