RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PDE1CQ14123 709 aaPredicted RBP17.26■□□□□ 0.35
CTDP1-201ENST00000075430 FLOT2Q14254 428 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 NADK2Q4G0N4 442 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
CTDP1-201ENST00000075430 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 TRIML2Q8N7C3 387 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 NDRG1Q92597 394 aaKnown RBP17.26■□□□□ 0.35
CTDP1-201ENST00000075430 LPAR1Q92633 364 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 FAM149B1Q96BN6 582 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 NUF2Q9BZD4 464 aa17.26■□□□□ 0.35
CTDP1-201ENST00000075430 TRUB2O95900 331 aaKnown RBP17.25■□□□□ 0.35
CTDP1-201ENST00000075430 SERPINA6P08185 405 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 DHRS4L1P0CG22 281 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 SLC18A1P54219 525 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 YWHAEP62258 255 aaKnown RBP17.25■□□□□ 0.35
CTDP1-201ENST00000075430 EEF1DP3Q658K8 133 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ZNF772Q68DY9 489 aaPredicted RBP17.25■□□□□ 0.35
CTDP1-201ENST00000075430 CYP2R1Q6VVX0 501 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 PDSS2Q86YH6 399 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 MMADHCQ9H3L0 296 aaPredicted RBP17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ST6GALNAC4Q9H4F1 302 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 CHN2P52757 468 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ATG14Q6ZNE5 492 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 MAP7D3Q8IWC1 876 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ZNF781Q8N8C0 355 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 FAM192AQ9GZU8 254 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 TMPRSS4Q9NRS4 437 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 H3BSA7 217 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 KCNK1O00180 336 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 APOL1O14791 398 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 TGDSO95455 350 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 RALBP11234 206 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ARSAP15289 507 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 TGFB2P61812 414 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 CAPSQ13938 189 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 SLC9B1Q4ZJI4 515 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 DNAAF3Q8N9W5 541 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ZNF280CQ8ND82 737 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 DIS3LQ8TF46 1054 aaKnown RBP17.25■□□□□ 0.35
CTDP1-201ENST00000075430 RSAD1Q9HA92 442 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 POPDC2Q9HBU9 364 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 ASNSD1Q9NWL6 643 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 CNTN3Q9P232 1028 aa17.25■□□□□ 0.35
CTDP1-201ENST00000075430 MICAL2O94851 1124 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 TPH1P17752 444 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 XKR3Q5GH77 459 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 TRIM74Q86UV6 250 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 PYROXD2Q8N2H3 581 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 PCDH20Q8N6Y1 951 aaKnown RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 PLD5Q8N7P1 536 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 GRIN3AQ8TCU5 1115 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 OR52B2Q96RD2 323 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 GMLQ99445 158 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 HES2Q9Y543 173 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 ZNFX1Q9P2E3 1918 aaKnown RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 C10orf71Q711Q0 1435 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 ANKRD33BA6NCL7 494 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 BUD23O43709 281 aaKnown RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 CRABP2P29373 138 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 IDH3AP50213 366 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 GSTA3Q16772 222 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 FAM83AQ86UY5 434 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 ARHGAP18Q8N392 663 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 ZFAND2BQ8WV99 257 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 TFB1MQ8WVM0 346 aaKnown RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 DCUN1D1Q96GG9 259 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 PAK5Q9P286 719 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 FAF1Q9UNN5 650 aaPredicted RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 RPL26L1Q9UNX3 145 aaKnown RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 SSX2IPQ9Y2D8 614 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 HCRTO43612 131 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 FKBP6O75344 327 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 RGS20O76081 388 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 BACE1P56817 501 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 ACAD11Q709F0 780 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 XYLT1Q86Y38 959 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 C20orf96Q9NUD7 363 aaPredicted RBP17.24■□□□□ 0.35
CTDP1-201ENST00000075430 AP4B1Q9Y6B7 739 aa17.24■□□□□ 0.35
CTDP1-201ENST00000075430 DNAH12Q6ZR08 3092 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 HMX2A2RU54 273 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 F8W8V4 182 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 CHRNGP07510 517 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 LCP1P13796 627 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 TEDDM1Q5T9Z0 273 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 PNPLA1Q8N8W4 532 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 ANKRD36BP1Q96IX9 119 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 DHRS4Q9BTZ2 278 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 COG4Q9H9E3 785 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 ZBTB14O43829 449 aa17.23■□□□□ 0.35
CTDP1-201ENST00000075430 ITGA2BP08514 1039 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms