RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NR2C2P49116 596 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ARMC12Q5T9G4 340 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 STRA8Q7Z7C7 330 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ANKRD52Q8NB46 1076 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 DCDC2Q9UHG0 476 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ASTN1O14525 1302 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 A0A0G2JLL6 359 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NT5C1B-RDH14C9J2C7 533 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 FGF10O15520 208 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ARIH2O95376 493 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 CXCL14O95715 111 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ENO3P13929 434 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NCKAP1LP55160 1127 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 PRRT2Q7Z6L0 340 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 RARGP13631 454 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 BRCC3P46736 316 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 AP2B1P63010 937 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 LRRC8DQ7L1W4 858 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 TOP6BLQ8N6T0 577 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 C1QTNF7Q9BXJ2 289 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ILKAPQ9H0C8 392 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 FZD9O00144 591 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 OCM2P0CE71 109 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 PGM1P36871 562 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 EPS8L1Q8TE68 723 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 FAM111AQ96PZ2 611 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 POLR1EQ9GZS1 481 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 PRDM16Q9HAZ2 1276 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 UTP6Q9NYH9 597 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NOP53Q9NZM5 478 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 OR1D2P34982 312 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 SMAD3P84022 425 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ACOX1Q15067 660 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ZACNQ401N2 412 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 OR5B17Q8NGF7 314 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 APBB2Q92870 758 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 TUBGCP3Q96CW5 907 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 RBBP8Q99708 897 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NXF3Q9H4D5 531 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 WARS2Q9UGM6 360 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 DYRK3O43781 588 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 INHAP05111 366 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 RPSAP08865 295 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 MAPK1P28482 360 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 MMP13P45452 471 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ILF2Q12905 390 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NOL9Q5SY16 702 aaKnown RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 SETD3Q86TU7 594 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 GLIS3Q8NEA6 775 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 FBXO25Q8TCJ0 367 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 NR1H4Q96RI1 486 aaPredicted RBP11.38□□□□□ -0.59
RGPD5-201ENST00000016946 TMEM161AQ9NX61 479 aa11.38□□□□□ -0.59
RGPD5-201ENST00000016946 HACD1B0YJ81 288 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 ERVK-10P10266 1014 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 TPH1P17752 444 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PTPN3P26045 913 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 ARID3BQ8IVW6 561 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 HES6Q96HZ4 224 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 KCNK16Q96T55 309 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CCDC3Q9BQI4 270 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 GID8Q9NWU2 228 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PADI3Q9ULW8 664 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SLC27A5Q9Y2P5 690 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 MTO1Q9Y2Z2 717 aaKnown RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 THOP1P52888 689 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SKOR1P84550 965 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SPPL2BQ8TCT7 592 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 JADE3Q92613 823 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 C6orf203Q9P0P8 240 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 RUVBL2Q9Y230 463 aaKnown RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 RNF103O00237 685 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PRKCZQ05513 592 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 TERF2Q15554 542 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 DNAL1Q4LDG9 190 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 MTMR8Q96EF0 704 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 FAR2Q96K12 515 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PAFAH2Q99487 392 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 VAV3Q9UKW4 847 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 EIF3HO15372 352 aaKnown RBP eCLIP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PEX10O60683 326 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 MAPK8P45983 427 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 GLRBP48167 497 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CD151P48509 253 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 TGM3Q08188 693 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 RAP1GAP2Q684P5 730 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms