RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Sgsm3Q8VCZ6 750 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mrpl57Q9CQF8 102 aaKnown RBP9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 CenpnQ9CZW2 337 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Plscr1Q9JJ00 328 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mapk11Q9WUI1 364 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Hfm1D3Z4R1 1434 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Capn1O35350 713 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mtnd2P03893 345 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Sfmbt2Q5DTW2 938 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 CoilQ5SU73 570 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Arhgap12Q8C0D4 838 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Eaf2Q91ZD6 262 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ndufb9Q9CQJ8 179 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Klhl26Q8BGY4 606 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ube2sQ921J4 223 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ppp1r3fQ9JIG4 799 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gm7945F6QI24 236 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Kbtbd2G3X9X1 623 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gm5849J3QPE5 117 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Tnk2O54967 1055 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Hipk1O88904 1210 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Lins1Q3U1D0 764 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Syce2Q505B8 171 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gm4952Q5FW57 296 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Adora2bQ60614 332 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Kpna1Q60960 538 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Prkg2Q61410 762 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rbm15bQ6PHZ5 887 aaKnown RBP9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Clca4aQ6Q473 924 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gpr101Q80T62 511 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Atp2c1Q80XR2 918 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mup21Q80YX8 181 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Reep1Q8BGH4 201 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Btbd9Q8C726 612 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Zc3h10Q8R205 435 aaKnown RBP9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Med24Q99K74 987 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Slc26a4Q9R155 780 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Slc22a3Q9WTW5 551 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Morc1Q9WVL5 950 aa9.55□□□□□ -0.88
Col6a5-201ENSMUST00000165165 PzpQ61838 1495 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 NsmafO35242 920 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Sult3a1O35403 293 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 TxnP10639 105 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Fgfr1P16092 822 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 TsxP70675 144 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Pla2g6P97819 807 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Scn2bQ56A07 215 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Nudt16Q6P3D0 195 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ubp1Q811S7 540 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Las2Q8CB14 526 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 St7lQ8K4P7 559 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Aspscr1Q8VBT9 550 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Pcdhb3Q91XZ7 784 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 GsdmcQ99NB5 468 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Snx7Q9CY18 387 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Scrn1Q9CZC8 414 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Fam129cD3YZB0 591 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gm8857L7N291 182 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Sema6aO35464 1031 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 PcnaP17918 261 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Serpina5P70458 405 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Fam83bQ0VBM2 1012 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gm5592Q3V0A6 857 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 CttnQ60598 546 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 N6amt1Q6SKR2 214 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rsl1d1Q8BVY0 452 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Klhl35Q9CZ49 574 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Tnfaip8l2Q9D8Y7 184 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rgs1Q9JL25 209 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 FancfE9Q5Z5 343 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Gadd45aP48316 165 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Q3UJP5 209 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 P4ha2Q60716 537 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Larp4bQ6A0A2 741 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Tmc3Q7TQ69 1130 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Fbxl21Q8BFZ4 434 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Usp38Q8BW70 1042 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Stfa2l1Q8BWM3 103 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Hars2Q99KK9 505 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mageb16Q9CWV4 363 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Eif4enif1Q9EST3 983 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Epm2aQ9WUA5 330 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Extl3Q9WVL6 918 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 HnrnpdlQ9Z130 301 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ttll8A4Q9F1 832 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Mroh4G3X8W1 983 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Rab11fip2G3XA57 512 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Shmt1P50431 478 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ptgs2Q05769 604 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Zmym5Q3U2E2 627 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Olfr169Q7TS53 313 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Q8BL95 290 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Q91WD4 421 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 StrbpQ91WM1 672 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Stoml2Q99JB2 353 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ssr3Q9DCF9 185 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 LactbQ9EP89 551 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Trim2Q9ESN6 744 aaKnown RBP9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Ino80Q6ZPV2 1559 aa9.54□□□□□ -0.88
Col6a5-201ENSMUST00000165165 Scaf11E9PZM7 1456 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms