RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Anxa13Q99JG3 317 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Txndc12Q9CQU0 170 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 S100pbpQ9D5K4 396 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Aff4Q9ESC8 1160 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Trpm5Q9JJH7 1158 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Col5a2Q3U962 1497 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Dhtkd1A2ATU0 921 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 TyrobpO54885 114 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 IppP28575 584 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Siah1bQ06985 282 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Syce2Q505B8 171 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Gm5414Q6IFZ8 552 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Far2Q7TNT2 515 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tmem220Q8BP07 167 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zbtb44Q8R0A2 453 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Tbrg4Q91YM4 630 aaKnown RBP15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sugt1Q9CX34 336 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Hsd17b2P51658 381 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 CiitaP79621 1155 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sox8Q04886 464 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Pcgf5Q3UK78 256 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Arhgef9Q3UTH8 516 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Zdhhc17Q80TN5 632 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Sh3rf3Q8C120 878 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Actl7aQ9QY84 440 aa15.96■□□□□ 0.15
Ccdc88b-201ENSMUST00000113440 Akap11E9Q777 1895 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Wdr49A0A0N4SUK7 710 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 L3mbtl1A2A5N8 826 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Drg1P32233 367 aaKnown RBP15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Fscn1Q61553 493 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ripor1Q68FE6 1223 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gprc5aQ8BHL4 356 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Nlrp4bQ8C6J9 863 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Syt15Q8C6N3 418 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Glra3Q91XP5 464 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rdh14Q9ERI6 334 aa15.96■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc12a1P55014 1095 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Krt72Q6IME9 520 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Washc5Q8C2E7 1159 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Lrrc71Q9D3W5 558 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slfn2Q9Z0I6 378 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Myh6Q02566 1938 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Abca15E9PWH4 1668 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tatdn2B7ZNL9 783 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Cyp2f2P33267 491 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ppp3ccP48455 513 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Klrb1Q0ZUP1 214 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Eif4bQ8BGD9 611 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Iars2Q8BIJ6 1012 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ndc80Q9D0F1 642 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Dlgap1Q9D415 992 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 CrotQ9DC50 612 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc15a2Q9ES07 729 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rbck1Q9WUB0 508 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc26a3Q9WVC8 757 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 4930469K13RikA0A286YDB2 92 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gm8879F6R3J9 157 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Akap10O88845 662 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Znf367Q0VDT2 340 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gpd1lQ3ULJ0 351 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ugt3a1Q3UP75 523 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tas2r102Q7M717 329 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc44a2Q8BY89 706 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Slc13a3Q91Y63 600 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 CoprsQ9CQ13 173 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Kif12Q9D2Z8 642 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ptgdr2Q9Z2J6 382 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr456B2RT27 312 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr414E9Q5P8 317 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gm5814J3QP80 125 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Sec22bO08547 215 aaKnown RBP15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Man1a1P45700 655 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 CcnjlQ5SRT8 387 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Etaa1Q5SVT3 877 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Trpc1Q61056 793 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Stk40Q7TNL3 435 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr458Q8VF80 313 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Olfr457Q8VGP5 313 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Q922M7 232 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Fbxo32Q9CPU7 355 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Mrfap1Q9CQL7 125 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tbk1Q9WUN2 729 aa15.95■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Scgb2b21A0A087WQA9 112 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Zfp846G3X996 541 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tnfrsf18O35714 228 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Sash1P59808 1230 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Abce1P61222 599 aaKnown RBP15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Zswim5Q80TC6 1188 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Orai2Q8BH10 250 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Abraxas1Q8BPZ8 407 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tbc1d13Q8R3D1 400 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Rnf181Q9CY62 165 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Spag6Q9JLI7 507 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Arhgef10Q8C033 1345 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Arrdc4A0A0B4J1F4 415 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tbc1d16A2ABG4 766 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Gm4302E9PX25 294 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Tekt5G5E8A8 557 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Ap3d1O54774 1199 aa15.94■□□□□ 0.14
Ccdc88b-201ENSMUST00000113440 Dab1P97318 588 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms