RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm5538W4VSP6 401 aa13.3□□□□□ -0.28
Nup88-203ENSMUST00000108531 Scn10aQ6QIY3 1958 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Scn1aA2APX8 2009 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Serpinb3cA2RSF9 386 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Zfp850J3QPC5 689 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mark2Q05512 776 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pnpla5Q32LZ8 432 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Lrrc14bQ3UJB3 510 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mfhas1Q3V1N1 1048 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm10392Q3V3I3 114 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Proser1Q5PRE5 913 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Htr1aQ64264 421 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fbxo41Q6NS60 873 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fastkd5Q7TMV3 762 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Celf6Q7TN33 460 aaKnown RBP13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Zdhhc17Q80TN5 632 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tyw3Q8BSA9 257 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Aph1bQ8C7N7 257 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tbc1d13Q8R3D1 400 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Slc22a19Q8VCA0 551 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Lpin1Q91ZP3 924 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Wbp11Q923D5 641 aaKnown RBP13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Rtfdc1Q99K95 307 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tpgs1Q99MS8 303 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gfra4Q9JJT2 260 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tnfrsf10bQ9QZM4 381 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Akt3Q9WUA6 479 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm5689F6Y2A6 97 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Axin1O35625 863 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Crabp2P22935 138 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Lpar1P61793 364 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pdcd1Q02242 288 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Nxpe4Q52KP5 543 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Esyt3Q5DTI8 891 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Scaf8Q6DID3 1268 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Abhd10Q6PE15 297 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cnksr2Q80YA9 1032 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fzd10Q8BKG4 582 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cgrrf1Q8BMJ7 332 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Clec4gQ8BNX1 294 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Slc36a1Q8K4D3 475 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Dedd2Q8QZV0 330 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr397Q8VEZ6 315 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 FtcdQ91XD4 541 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mrps17Q9CQE3 120 aaKnown RBP13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pgam1Q9DBJ1 254 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tle6Q9WVB3 581 aa13.29□□□□□ -0.28
Nup88-203ENSMUST00000108531 UprtB1AVZ0 310 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 2310061I04RikB8JJ69 315 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Zbed6D2EAC2 980 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm10722F6VLK5 217 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 ChrngP04760 519 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cd2P08920 344 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Kcnq1P97414 668 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pecam1Q08481 727 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Trim71Q1PSW8 855 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Meaf6Q2VPQ9 191 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pcmtd2Q8BHD8 359 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Hspbap1Q8BK58 483 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gbp9Q8BTS3 619 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Sgsm3Q8VCZ6 750 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fam192aQ91WE2 254 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Trim7Q923T7 510 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ndufa10Q99LC3 355 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tas1r1Q99PG6 842 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Utp11Q9CZJ1 253 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tbc1d20Q9D9I4 402 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Eif4e3Q9DBB5 207 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Hs6st3Q9QYK4 470 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 St6galnac4Q9R2B6 360 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tmem115Q9WUH1 350 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 NinQ61043 2035 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pcdh7A0A0A6YY83 1255 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm15155B1B034 138 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Kifc5bE9PUA5 672 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 ShdO88834 343 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Matn1P51942 500 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Dsc2P55292 902 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Bop1P97452 732 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Samd11Q1RNF8 542 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Q3UJP5 209 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 E330034G19RikQ3UWX6 351 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 DcstampQ7TNJ0 470 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tlk1Q8C0V0 766 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 ClmnQ8C5W0 1052 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ephb1Q8CBF3 984 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mettl24Q8CCB5 363 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Kct2Q8K201 259 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ubap2Q91VX2 1132 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Usp3Q91W36 520 aaKnown RBP13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Taf11Q99JX1 211 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Nudt8Q9CR24 210 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 PmpcbQ9CXT8 489 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Acbd6Q9D061 282 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gdap2Q9DBL2 498 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Neu2Q9JMH3 379 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Efcab12V9GXH0 673 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Disp2Q8CIP5 1345 aa13.28□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm6657A0A1B0GRJ3 277 aa13.27□□□□□ -0.29
Nup88-203ENSMUST00000108531 Mindy4b-psA0A1W2P7H6 457 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms