RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Chn2Q80XD1 332 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Eif2aQ8BJW6 581 aaKnown RBP7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Clec1aQ8BWY2 269 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pde10aQ8CA95 790 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Trip10Q8CJ53 603 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Arhgap18Q8K0Q5 663 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Vangl2Q91ZD4 521 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Cdk9Q99J95 372 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ino80bQ99PT3 375 aaKnown RBP7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ndufaf1Q9CWX2 328 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 CacybpQ9CXW3 229 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slxl1Q9D515 155 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Syde1Q9DBZ9 737 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Btbd19S4R1I0 287 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Cep290Q6A078 2472 aa7.12□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Zfp612A0A1D5RMC2 672 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ildr2B5TVM2 661 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 D3Z070 196 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Gm4871D3Z0W7 314 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Olfr731F8VQB9 326 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Top6blJ3QMY9 579 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pbx3O35317 434 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ZfaP23607 742 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Scp2P32020 547 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Msh2P43247 935 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Vps4bP46467 444 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Trim43cP86449 446 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Tex11Q14AT2 947 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Mif4gdQ3UBZ5 222 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 CcnjlQ5SRT8 387 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ripor1Q68FE6 1223 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Sez6lQ6P1D5 963 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Il17reQ8BH06 637 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Agbl2Q8CDK2 862 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pcdhb7Q8CDY9 829 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pkn3Q8K045 878 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Defb19Q8K3I8 83 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Hars2Q99KK9 505 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slc25a11Q9CR62 314 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 GmprQ9DCZ1 345 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 MkksQ9JI70 570 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Akr1c12Q9JLI0 323 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Cry2Q9R194 592 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Col11a2Q64739 1736 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rabgap1lA6H6A9 815 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pate3B3GLJ3 98 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Arhgef26D3YYY8 869 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slc4a9E9PUP3 929 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Kng1O08677 661 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ChkaO54804 453 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 PigrO70570 771 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slc2a4P14142 509 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Tap2P36371 702 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Sar1aP36536 198 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rasgrf2P70392 1189 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Fmo3P97501 534 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 GscQ02591 256 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ZbbxQ0P5X5 716 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pih1d3Q3KNI6 218 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 PterQ60866 349 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Itih3Q61704 889 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Plk4Q64702 925 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ChpfQ6IQX7 774 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rimbp2Q80U40 1072 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Trnp1Q80ZI1 223 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ChfrQ810L3 664 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rbm22Q8BHS3 420 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Dupd1Q8BK84 215 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Clasp2Q8BRT1 1286 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Tbc1d13Q8R3D1 400 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Nipsnap3bQ9CQE1 247 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Zfp623Q9CY99 499 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ing2Q9ESK4 281 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rfx5Q9JL61 658 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Mta2Q9R190 668 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slc8a3S4R2P9 928 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Cntnap4Q99P47 1310 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Fam81bA0A140LI28 432 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 TprnA2AI08 749 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ism1A2ATD1 454 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Nr3c1P06537 783 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Oprl1P35377 367 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Tlx1P43345 332 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Scg3P47867 471 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Slc24a2Q14BI1 711 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pdss1Q33DR2 409 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Nt5dc3Q3UHB1 546 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 ThrspQ62264 150 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Ino80dQ66JY2 873 aaKnown RBP7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Akap7Q7TN79 314 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 March4Q80TE3 409 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Aoc2Q812C9 757 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Frmd4aQ8BIE6 1020 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rps6kc1Q8BLK9 1056 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Pggt1bQ8BUY9 377 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Oit3Q8R4V5 546 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Rwdd4Q9CPR1 188 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Q9CQC3 228 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Mpp5Q9JLB2 675 aa7.11□□□□□ -1.27
Col6a6-201ENSMUST00000060896 Trpc2Q9R244 1172 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms