RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Gm5415E9PXF3 478 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 NogP97466 232 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ntrk3Q6VNS1 825 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 DseQ8BLI4 958 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Brat1Q8C3R1 822 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Vangl2Q91ZD4 521 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gmcl1Q920G9 524 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ruvbl2Q9WTM5 463 aaKnown RBP9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gm45208A0A140LJ36 292 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ildr2B5TVM2 661 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Clip3B9EHT4 547 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Vmn2r55G3UWZ4 781 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Vmn2r53L7N473 806 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 McuQ3UMR5 350 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Tmem130Q6NXM3 419 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Slitrk1Q810C1 696 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gprc5dQ9JIL6 344 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 C1qtnf1Q9QXP7 281 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Sox6P40645 827 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Sephs2P97364 452 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Vps51Q3UVL4 782 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Syce1lQ5D525 247 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Lrrc15Q80X72 579 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Zbtb8bQ8CII0 484 aa9.01□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Olfr1023A2ASU6 311 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Dennd5bA2RSQ0 1274 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Erich1E9PY43 332 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Farp1F8VPU2 1048 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Cyp2f2P33267 491 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 SPINDOCQ05AH6 381 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Pgs1Q8BHF7 553 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Cdc16Q8R349 620 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Tada2bD3Z4Z0 420 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ifi206G3UZV2 921 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Erp29P57759 262 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 AaasP58742 546 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Dna2Q6ZQJ5 1062 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Cpsf4Q8BQZ5 211 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Chaf1bQ9D0N7 572 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Tsc22d3Q9Z2S7 137 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gm8369E9PZI3 166 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Polr1bP70700 1135 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Exoc3l4Q6DIA2 721 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gja6Q6S5G4 283 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Phc3Q8CHP6 981 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Mrpl47Q8K2Y7 252 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Trim31Q8R0K2 507 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Terb2Q9D494 218 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Dkc1Q9ESX5 509 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Serpini2Q9JK88 405 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Xrn1P97789 1719 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Kctd17E0CYQ0 296 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 SprtnG3X912 497 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 AmhP27106 555 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Msi1Q61474 362 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Znf784Q8BI69 297 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Usp38Q8BW70 1042 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Nup85Q8R480 656 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Kiaa2013Q91X21 634 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Cstf3Q99LI7 717 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Tubgcp4Q9D4F8 667 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Rpn2Q9DBG6 631 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Pdk2Q9JK42 407 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Prl6a1O35257 230 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 AgxtO35423 414 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Plpp4Q0VBU9 271 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Trcg1Q58Y74 825 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Eif2s1Q6ZWX6 315 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Q8BP99 230 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Nol3Q9D1X0 220 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Mxra8Q9DBV4 442 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 ArcQ9WV31 396 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Kiaa1210E9Q0C6 1637 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Aff1O88573 1216 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Foxp2P58463 714 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Serpina1cQ00896 412 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Serpina1dQ00897 413 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ceacam5Q3UKK2 947 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Q6GQU0 248 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Mamdc2Q8CG85 686 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Haus3Q8QZX2 570 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Bbs2Q9CWF6 721 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Prmt2Q9R144 448 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Myh15E9Q264 1925 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 R3hdm1E9Q9Q2 1135 aaKnown RBP9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Grip2G3XA20 1042 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Ifnar2O35664 513 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Itga4Q00651 1039 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Mif4gdQ3UBZ5 222 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Nlgn2Q69ZK9 836 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 4930513O06RikQ9D549 161 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Fam47eD3YWC7 402 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Rmdn3Q3UJU9 470 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Pcsk9Q80W65 694 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Efl1Q8C0D5 1127 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Rps6kl1Q8R2S1 544 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Zdhhc12Q8VC90 267 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Rnf144aQ925F3 292 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Robo1O89026 1612 aa9□□□□□ -0.97
Ttc28-201ENSMUST00000040111 Gm21083A0A0G2JFD5 256 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms