RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Klhl17Q6TDP3 640 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Kctd12Q6WVG3 327 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Usp8Q80U87 1080 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Elac2Q80Y81 831 aaKnown RBP13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Klhl2Q8JZP3 593 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Colgalt1Q8K297 617 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slc25a3Q8VEM8 357 aaKnown RBP13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ppp1r16bQ8VHQ3 568 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Sorcs3Q8VI51 1219 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ophn1Q99J31 802 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Arpc2Q9CVB6 300 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fam3aQ9D8T0 230 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Krt7Q9DCV7 457 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pi16Q9ET66 489 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Neu2Q9JMH3 379 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 PigqQ9QYT7 581 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dicer1Q8R418 1916 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm28043E0CXC2 719 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hcn4O70507 1186 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Lta4hP24527 611 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Adcy6Q01341 1165 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Proser1Q5PRE5 913 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cgrrf1Q8BMJ7 332 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ccdc151Q8BSN3 593 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 PigwQ8C398 503 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Unc45bQ8CGY6 931 aaKnown RBP13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pacs1Q8K212 961 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Itgbl1Q8VDV0 494 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tcaf2Q921K8 919 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Homer3Q99JP6 356 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 GatbQ99JT1 557 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rrp15Q9CYX7 281 aaKnown RBP13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Borcs5Q9D920 195 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 PignQ9R1S3 931 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Sh2d4bA6X942 431 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gjb1P28230 283 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cap1P40124 474 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfm3P63056 478 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Psmb4P99026 264 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ly9Q01965 654 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pdcd1Q02242 288 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ripply1Q2WG77 201 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Q3U4G0 281 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gucy2gQ6TL19 1100 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 LdhdQ7TNG8 484 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr533Q7TRT7 320 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gpr150Q8BL07 427 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Znf385bQ8BXJ8 482 aaKnown RBP13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr395Q8VGR3 312 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 MyocdQ8VIM5 935 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Prkag2Q91WG5 566 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Krt20Q9D312 431 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 1700031M16RikA0A087WSH0 82 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Abhd12bG3UZN6 359 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slc1a6O35544 561 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Prom1O54990 867 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Smyd5Q3TYX3 416 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 FcgrtQ61559 365 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Wdr91Q7TMQ7 748 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fam181bQ80VF6 417 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fzd10Q8BKG4 582 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gsto2Q8K2Q2 248 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Il36gQ8R460 164 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Katnal2Q9D3R6 539 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rsph3bQ9DA80 389 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ccdc86Q9JJ89 426 aa13.82□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm21731A0A286YDE9 180 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr652B9EHE6 318 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr220E9Q050 325 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 AmacrO09174 381 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 MafgO54790 162 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dnmt3bO88509 859 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 ShdO88834 343 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dnmt3cP0DOY1 709 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Lmnb1P14733 588 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 CblP22682 913 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 RenbpP82343 430 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dact3Q0PHV7 610 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hace1Q3U0D9 909 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Otol1Q4ZJM7 482 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rpf1Q7TND5 349 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Supt20hQ7TT00 530 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fads6Q80UG1 342 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ppm1lQ8BHN0 360 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 SybuQ8BHS8 665 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Plin5Q8BVZ1 463 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mul1Q8VCM5 352 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pcdhgb1Q91XX8 918 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Trem2Q99NH8 227 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Utp11Q9CZJ1 253 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Poc5Q9DBS8 558 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cd97Q9Z0M6 818 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 CitP49025 2055 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 ChgbP16014 677 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Zfy2P20662 777 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Impdh2P24547 514 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Asgr1P34927 284 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 LdlrP35951 862 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Kcnj6P48542 425 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Aqp4P55088 323 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms