RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 AA792892Q8C6S1 278 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Klhl11Q8CE33 709 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Polr2bQ8CFI7 1174 aaKnown RBP9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Nup58Q8R332 587 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Paip1Q8VE62 400 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Tmem30aQ8VEK0 364 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 DeraQ91YP3 318 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Apopt1Q9CQW7 192 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 PirQ9D711 290 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Rfx5Q9JL61 658 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Pcsk1nQ9QXV0 258 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Plod2Q9R0B9 737 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Dock1Q8BUR4 1865 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Gm5580A0A0N4SVP8 411 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Zfand4D3Z3C6 739 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Adam19O35674 920 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 TertO70372 1122 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Smpd2O70572 419 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Fgd3O88842 733 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Calb1P12658 261 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Fgfr1P16092 822 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ephb3P54754 993 aaKnown RBP9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ano9P86044 747 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ctnnb1Q02248 781 aaKnown RBP9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Myadml2Q08AU7 307 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 RasefQ5RI75 627 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 CochQ62507 552 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Wnt8aQ64527 354 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 RetsatQ64FW2 609 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 ScapQ6GQT6 1276 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Shkbp1Q6P7W2 704 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Bnip1Q6QD59 228 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Necab1Q8BG18 352 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ppp1r12bQ8BG95 976 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Cd99l2Q8BIF0 237 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Olfm2Q8BM13 448 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Asb2Q8K0L0 634 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Eif3hQ91WK2 352 aaKnown RBP9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Creb3l3Q91XE9 479 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Sike1Q9CPR7 207 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Spg21Q9CQC8 308 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Tomm70Q9CZW5 611 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Spaca7Q9D2S4 182 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Noxred1Q9D3S5 366 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Atp6v1e2Q9D593 226 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ift22Q9DAI2 185 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Egfl6Q9JJZ5 550 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Gpc6Q9R087 555 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 PygmQ9WUB3 842 aaKnown RBP9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Trpc7Q9WVC5 862 aa9.02□□□□□ -0.97
Trim42-201ENSMUST00000035026 Dnah12Q3V0Q1 3086 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f15A0A087WR44 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f12A0A0A0MQP3 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Igkv17-121A0A0G2JFA8 117 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f9A2BFZ7 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f7A2BHG6 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f19A2CG71 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f10A2CG92 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f3A2CGC2 496 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Etnk2A7MCT6 385 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f13B8JKF6 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ptrhd1D3Z4S3 140 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f2J3QMS5 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f25J3QMV9 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f6J3QMW9 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f26J3QNK2 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f24J3QNQ5 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f8J3QQ50 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f17L7MU81 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f18L7MU83 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Gm3239L7N2D9 227 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Eftud2O08810 971 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Kcnh2O35219 1162 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Mmp15O54732 657 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Dnase1l3O55070 310 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Slc3a2P10852 526 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Slc12a1P55014 1095 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Tubb4bP68372 445 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Prdx5P99029 210 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f14Q1LZI5 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Acot6Q32Q92 419 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Ndst1Q3UHN9 882 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Serpinb6dQ3UWK8 375 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Btbd35f27Q5FWA1 498 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Zbtb17Q60821 794 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Eps15l1Q60902 907 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Trim25Q61510 634 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Q66JV7 365 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 PapolgQ6PCL9 739 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Krt75Q8BGZ7 551 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Zcchc4Q8BKW4 512 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Rd3Q8BRE0 195 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 AopepQ8BXQ6 817 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Fbxo43Q8CDI2 640 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Usp27Q8CEG8 438 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Gatad2aQ8CHY6 629 aaKnown RBP9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 FgbQ8K0E8 481 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Stap2Q8R0L1 411 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Olfr385Q8VGT1 312 aa9.01□□□□□ -0.97
Trim42-201ENSMUST00000035026 Prb1Q91X93 504 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms