RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Adam2Q60718 735 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Lcp1Q61233 627 aaKnown RBP12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cd180Q62192 661 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Edrf1Q6GQV7 1239 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Zscan4cQ80VJ6 506 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Q8BGN9 141 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cd300ldQ8VCH2 221 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Trub2Q91WG3 331 aaKnown RBP12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Fis1Q9CQ92 152 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 MispQ9D279 648 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Q9D3J9 298 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Rpap3Q9D706 660 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Slc13a2Q9ES88 586 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gm35911A0A1D5RLS7 214 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Arl8bQ9CQW2 186 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Dcaf6Q9DC22 876 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tspan4Q9DCK3 238 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 FignQ9ERZ6 759 aa12.51□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Spata6lB2RV46 347 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gm2244L7N2A3 218 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Ikzf3O08900 507 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Armc7Q3UJZ3 198 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 DgkqQ6P5E8 934 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Magee1Q6PCZ4 918 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 SyncripQ7TMK9 623 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Ece2Q80Z60 881 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 SynpoQ8CC35 929 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Mark4Q8CIP4 752 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 PrameQ9D4Z5 464 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Plxnc1Q9QZC2 1574 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tubb1A2AQ07 451 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Vmn2r74E9PW21 853 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gm21897J3KMP5 500 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gm21750L7N228 499 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 H2-AaP01910 256 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Mcpt4P21812 246 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cd40lgP27548 260 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Smu1Q3UKJ7 513 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Armc5Q5EBP3 926 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Adora2bQ60614 332 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Skiv2lQ6NZR5 1244 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Rfwd3Q8CIK8 774 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Nudt13Q8JZU0 352 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 IlkapQ8R0F6 392 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Olfr1414Q8VGU5 312 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 FopnlQ9CZS3 174 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 MtrexQ9CZU3 1040 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Abcb10Q9JI39 715 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gyg1Q9R062 333 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Stau1Q9Z108 487 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Ak9G3UYQ4 1894 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Olfr521E9Q519 321 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Eif3dO70194 548 aaKnown RBP12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 SykP48025 629 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gp1bbP56400 206 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Psme3P61290 254 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tmem65Q4VAE3 234 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Atp13a4Q5XF90 1193 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Kcna4Q61423 654 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Zfp512bQ6PHP4 879 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Fbxo44Q8BK26 255 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Ing4Q8C0D7 249 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 AagabQ8R2R3 316 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Plbd1Q8VCI0 550 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tmem45a2B7ZWJ5 289 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tsc22d2E9Q7M2 769 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 MlxO08609 298 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 AmacrO09174 381 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gosr2O35166 212 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Plin2P43883 425 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 AdslP54822 484 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Tmem59lQ7TNI2 337 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Pqlc1Q80XM9 271 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cdkn2aipQ8BI72 563 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gper1Q8BMP4 375 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Hat1Q8BY71 416 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Elmo3Q8BYZ7 720 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Q8C6G1 249 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Slc8a2Q8K596 921 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 MyocdQ8VIM5 935 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Asb6Q91ZU1 418 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 4930503E14RikQ9D583 177 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Ssr3Q9DCF9 185 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Prkab1Q9R078 270 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cldn3Q9Z0G9 219 aa12.5□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Hoxb8P09632 243 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Alkbh1P0CB42 389 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Gbx2P48031 348 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cacnb3P54285 484 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Frg1P97376 258 aaKnown RBP12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Brsk2Q69Z98 735 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Scaf8Q6DID3 1268 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 McubQ810S1 345 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Spef1Q99JL1 234 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 C87977A2A958 498 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Kcnu1O54982 1121 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 RarbP22605 482 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Mapkapk2P49138 386 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Cd300lgQ1ERP8 331 aa12.49□□□□□ -0.41
Pcdhac1-201ENSMUST00000007584 Brd9Q3UQU0 596 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms