RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 FGF18O76093 207 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ZSCAN5DPP0CG00 497 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 YWHAQP27348 245 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 DRG2P55039 364 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 GDF10P55107 478 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 TAF10Q12962 218 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 SEMA3BQ13214 749 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 TFDP2Q14188 446 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 NOMO1Q15155 1222 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 RASIP1Q5U651 963 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 EMBQ6PCB8 327 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 MON1AQ86VX9 555 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 HERC6Q8IVU3 1022 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 FIBCD1Q8N539 461 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 EIF1ADQ8N9N8 165 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 TSEN2Q8NCE0 465 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 RNF139Q8WU17 664 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 HERVK_113Q902F9 699 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 CLP1Q92989 425 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 FBXO32Q969P5 355 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ZBTB9Q96C00 473 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 AFF4Q9UHB7 1163 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 ZNF148Q9UQR1 794 aa18.25■□□□□ 0.51
PHGDH-232ENST00000641947 DRG1Q9Y295 367 aaKnown RBP18.25■□□□□ 0.51
PHGDH-232ENST00000641947 DOCK4Q8N1I0 1966 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 SLC38A8A6NNN8 435 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 APOL1O14791 398 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 LILRB3O75022 631 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 URODP06132 367 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 ITGAVP06756 1048 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 AMPD1P23109 780 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 GGCXP38435 758 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 VPS41P49754 854 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 GBE1Q04446 702 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 SLC10A2Q12908 348 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-232ENST00000641947 EFHC2Q5JST6 749 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 NCBP2-AS2Q69YL0 99 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 TTC13Q8NBP0 860 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 ZNF461Q8TAF7 563 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 FBXO25Q8TCJ0 367 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-232ENST00000641947 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-232ENST00000641947 LRRN4Q8WUT4 740 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 TKTL2Q9H0I9 626 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 ARHGEF4Q9NR80 690 aa18.24■□□□□ 0.51
PHGDH-232ENST00000641947 SHROOM3Q8TF72 1996 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 DENND4CQ5VZ89 1909 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 RTN3O95197 1032 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-232ENST00000641947 GAS8O95995 478 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 F9P00740 461 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 KRT14P02533 472 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 PPM1AP35813 382 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 NRLP54845 237 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 EIF3EP60228 445 aaKnown RBP18.23■□□□□ 0.51
PHGDH-232ENST00000641947 RPL10AP62906 217 aaKnown RBP18.23■□□□□ 0.51
PHGDH-232ENST00000641947 ARTNQ5T4W7 220 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 SYDE1Q6ZW31 735 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-232ENST00000641947 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 ZBED2Q9BTP6 218 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 ASIC3Q9UHC3 531 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 INSL6Q9Y581 213 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 PCDHB12Q9Y5F1 795 aa18.23■□□□□ 0.51
PHGDH-232ENST00000641947 CREB3O43889 395 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 TBX18O95935 607 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ATF2P15336 505 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 TGM2P21980 687 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 AIF1P55008 147 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 PLTPP55058 493 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 DPYSQ14117 519 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 MSANTD2Q6P1R3 559 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 HDXQ7Z353 690 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ZC3H18Q86VM9 953 aaKnown RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 UNC45BQ8IWX7 931 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 CCDC33Q8N5R6 958 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 KLHL23Q8NBE8 558 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 NETO2Q8NC67 525 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 P3H4Q92791 437 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 TTLL2Q9BWV7 592 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 FRMD8P1Q9BZ68 369 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 WDCPQ9H6R7 721 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ARHGEF38Q9NXL2 777 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 RCOR3Q9P2K3 495 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 HEY1Q9Y5J3 304 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 TRANK1O15050 2925 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 MTCL1Q9Y4B5 1905 aaKnown RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ATG2AQ2TAZ0 1938 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ZDHHC11BP0C7U3 371 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 RBP3P10745 1247 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 RAB33AQ14088 237 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 GSTA5Q7RTV2 222 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 ART4Q93070 314 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 FEZ2Q9UHY8 353 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 HPCAL4Q9UM19 191 aa18.22■□□□□ 0.51
PHGDH-232ENST00000641947 MAGED2Q9UNF1 606 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-232ENST00000641947 NEU3Q9UQ49 428 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms