RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 GOLGA6L19H0YKK7 550 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 AP5Z1O43299 807 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CALCAP01258 141 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 PDGFRBP09619 1106 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 PNMA6AP0CW24 399 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CSH1P0DML2 217 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CSH2P0DML3 217 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 P4HA1P13674 534 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 PLA2G2AP14555 144 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 GABRG2P18507 467 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 NDST1P52848 882 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 SEC13P55735 322 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 USP46P62068 366 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 FANCCQ00597 558 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 AMPD2Q01433 879 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 GCNT1Q02742 428 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 UBXN1Q04323 297 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CETN1Q12798 172 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 VEPH1Q14D04 833 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 SYCP1Q15431 976 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 DDR2Q16832 855 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 DUOXA1Q1HG43 343 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 MDH1BQ5I0G3 518 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 LYSMD4Q5XG99 296 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 LPCAT2Q7L5N7 544 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 DPH6Q7L8W6 267 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 KIAA1958Q8N8K9 716 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 ARL14EPQ8N8R7 260 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CCDC150Q8NCX0 1101 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 OR6B3Q8NGW1 331 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 SPATA18Q8TC71 538 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 SH3RF2Q8TEC5 729 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 WHAMMQ8TF30 809 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 HNRNPLLQ8WVV9 542 aaKnown RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 MYLPFQ96A32 169 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 P2RY11Q96G91 374 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 ZFRQ96KR1 1074 aaKnown RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 SNX25Q9H3E2 840 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CCDC86Q9H6F5 360 aaKnown RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CYP3A43Q9HB55 503 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 CISHQ9NSE2 258 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 TMEM30AQ9NV96 361 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 KIAA1522Q9P206 1035 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-225ENST00000641720 APEX2Q9UBZ4 518 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 FHOD1Q9Y613 1164 aa7.81□□□□□ -1.16
PHGDH-225ENST00000641720 USP9XQ93008 2570 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 A8MXQ7 604 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 OPHN1O60890 802 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 KLF8O95600 359 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 SERPINC1P01008 464 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TPM2P07951 284 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 CCDC130P13994 396 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TBXAS1P24557 533 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 CYP2F1P24903 491 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 PCSK1P29120 753 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 GNL1P36915 607 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 EIF2DP41214 584 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 IFNAR2P48551 515 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 LHX1P48742 406 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ZNF132P52740 706 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 CACNA2D1P54289 1103 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 RAD23BP54727 409 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TPM4P67936 248 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 SLC7A9P82251 487 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TSPY1Q01534 308 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 SMARCB1Q12824 385 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 SLC14A1Q13336 389 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 HNRNPDQ14103 355 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 DHCR24Q15392 516 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TRIP6Q15654 476 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 CFAP221Q4G0U5 840 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 HSF5Q4G112 596 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ZNF394Q53GI3 561 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 FKBP15Q5T1M5 1219 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 KLHDC7AQ5VTJ3 777 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 RHBDF2Q6PJF5 856 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TOGARAM2Q6ZUX3 1019 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 NAXDQ8IW45 347 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 SCUBE3Q8IX30 993 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ADGRG2Q8IZP9 1017 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 THEM5Q8N1Q8 247 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 B3GALNT2Q8NCR0 500 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 C1orf216Q8TAB5 229 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 MRPS31Q92665 395 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ZNF419Q96HQ0 510 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 LRIG1Q96JA1 1093 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 GCNAQ96QF7 691 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ERGIC2Q96RQ1 377 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ACBD6Q9BR61 282 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 TTLL2Q9BWV7 592 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 NAA15Q9BXJ9 866 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 B3GNT5Q9BYG0 378 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 XPO4Q9C0E2 1151 aaKnown RBP7.8□□□□□ -1.16
PHGDH-225ENST00000641720 RNF38Q9H0F5 515 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 PRORYQ9H606 182 aa7.8□□□□□ -1.16
PHGDH-225ENST00000641720 ABCB6Q9NP58 842 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms