RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MESDQ14696 234 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 SV2CQ496J9 727 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 WSCD1Q658N2 575 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 ITIH5Q86UX2 942 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 TFAP2BQ92481 460 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 FAM83CQ9BQN1 747 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 C11orf70Q9BRQ4 267 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 DNAI2Q9GZS0 605 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 LHX5Q9H2C1 402 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 GOLPH3Q9H4A6 298 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 HPS4Q9NQG7 708 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 ALG6Q9Y672 507 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
ERGIC3-220ENST00000640748 KIF26AQ9ULI4 1882 aaPredicted RBP12.46□□□□□ -0.42
ERGIC3-220ENST00000640748 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
ERGIC3-220ENST00000640748 TMEM110-MUSTN1A8MSY1 372 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 PDE2AO00408 941 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 DPYSL4O14531 572 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 CYB561D2O14569 222 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 HMGA1P17096 107 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 PAX3P23760 479 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 RRM1P23921 792 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 TUFMP49411 452 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 TAF6P49848 677 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 NDST1P52848 882 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 STILQ15468 1287 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 ITPRIPL2Q3MIP1 535 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 MGAT5BQ3V5L5 792 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 ARHGAP15Q53QZ3 475 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 SGO2Q562F6 1265 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 PPM1JQ5JR12 505 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 FSTL4Q6MZW2 842 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 WDR5BQ86VZ2 330 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 CMTM8Q8IZV2 173 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 GIPC2Q8TF65 315 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 HEXIM2Q96MH2 286 aaKnown RBP12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 TWNKQ96RR1 684 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 ZSWIM1Q9BR11 485 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 GKN1Q9NS71 199 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 TMLHEQ9NVH6 421 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 DSEQ9UL01 958 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 SDK1Q7Z5N4 2213 aa12.45□□□□□ -0.42
ERGIC3-220ENST00000640748 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 CEP104O60308 925 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 F11P03951 625 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 COMTP21964 271 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 MMP8P22894 467 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 CDC25CP30307 473 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 GPR15P49685 360 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 C2orf54Q08AI8 447 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 PTP4A2Q12974 167 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 VEPH1Q14D04 833 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 CNGA2Q16280 664 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 TMEM196Q5HYL7 178 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 CCDC70Q6NSX1 233 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 DENND1BQ6P3S1 775 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 UNC93AQ86WB7 457 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 ERICH1Q86X53 443 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 UBL4BQ8N7F7 174 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 STKLD1Q8NE28 680 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 USP13Q92995 863 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 FBRSL1Q9HCM7 1045 aaKnown RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 POLR3BQ9NW08 1133 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 HMGXB4Q9UGU5 601 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 STRIP2Q9ULQ0 834 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 ZFHX4Q86UP3 3567 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 USP24Q9UPU5 2620 aa12.44□□□□□ -0.42
ERGIC3-220ENST00000640748 KPNA7A9QM74 516 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 MYO1FO00160 1098 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 SPOPO43791 374 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 TUBBP07437 444 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 FAM163BP0C2L3 166 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 ARSAP15289 507 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 CTNNA2P26232 953 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 SLC1A1P43005 524 aa12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 PXNP49023 591 aaPredicted RBP12.43□□□□□ -0.42
ERGIC3-220ENST00000640748 ORC1Q13415 861 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms