RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 IRX1P78414 480 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 RALGPS1Q5JS13 557 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 KCNT2Q6UVM3 1135 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 GSDMBQ8TAX9 411 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 MTBPQ96DY7 904 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF184Q99676 751 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 XAB2Q9HCS7 855 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PDGFCQ9NRA1 345 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 C2CD2Q9Y426 696 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PPEF2O14830 753 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 KLF11O14901 512 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PDE5AO76074 875 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 ANPEPP15144 967 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 ACAP1Q15027 740 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PYROXD2Q8N2H3 581 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 EBNA1BP2Q99848 306 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 VCXQ9H320 206 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 BARX2Q9UMQ3 279 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
HNRNPU-228ENST00000640306 TRIP11Q15643 1979 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ZMPSTE24O75844 475 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 POLE2P56282 527 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 HDAC4P56524 1084 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 OLIG2Q13516 323 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 TMEM132DQ14C87 1099 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 N4BP2L1Q5TBK1 243 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 CXorf38Q8TB03 319 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF778Q96MU6 729 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 SPATC1LQ9H0A9 340 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 MMADHCQ9H3L0 296 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 NRDE2Q9H7Z3 1164 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 SNX9Q9Y5X1 595 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 PSAT1Q9Y617 370 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 DNAH12Q6ZR08 3092 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 LOC100653049A0A140TA62 436 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 KRT34O76011 436 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 IL18RAPO95256 599 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 GTF2A2P52657 109 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 OR52E8Q6IFG1 317 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 GPC2Q8N158 579 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 AGR3Q8TD06 166 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 PPP1R13LQ8WUF5 828 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 LGMNQ99538 433 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 CCDC106Q9BWC9 280 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 GBA2Q9HCG7 927 aaPredicted RBP17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ACSS2Q9NR19 701 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF358Q9NW07 568 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 PLA2G4CQ9UP65 541 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
HNRNPU-228ENST00000640306 TM7SF2O76062 418 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 ABCG1P45844 678 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 BOLA3Q53S33 107 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 FOXB2Q5VYV0 432 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 PNPOQ9NVS9 261 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 ZNF180Q9UJW8 692 aa17.08■□□□□ 0.33
HNRNPU-228ENST00000640306 TPP1O14773 563 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 PAPSS1O43252 624 aaPredicted RBP17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 GABBR2O75899 941 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 C6orf163Q5TEZ5 329 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 OLFML1Q6UWY5 402 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 TRIM42Q8IWZ5 723 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 TMPRSS4Q9NRS4 437 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 ZNF212Q9UDV6 495 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 PACSIN3Q9UKS6 424 aa17.08■□□□□ 0.32
HNRNPU-228ENST00000640306 TRDMT1O14717 391 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 P4HA1P13674 534 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 LCP1P13796 627 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 TGM2P21980 687 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 EDNRBP24530 442 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 RAP1GDS1P52306 607 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 PDE1BQ01064 536 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 PDK2Q15119 407 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 CELF3Q5SZQ8 465 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 NDRG1Q92597 394 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.328e-14■■■□□ 15.4
HNRNPU-228ENST00000640306 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 PAPOLBQ9NRJ5 636 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 NDE1Q9NXR1 346 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 PPME1Q9Y570 386 aa17.07■□□□□ 0.32
HNRNPU-228ENST00000640306 BCLAF3A2AJT9 711 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms