RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 A0A096LPK6 155 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 SLC12A8A0AV02 714 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ACAP1Q15027 740 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 UNC45BQ8IWX7 931 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 TTC30BQ8N4P2 665 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 PHF21BQ96EK2 531 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 OLFM3Q96PB7 478 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 KCNH4Q9UQ05 1017 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 DRG1Q9Y295 367 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 NCF1BA6NI72 391 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 NCF1CA8MVU1 366 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 PLA2G6O60733 806 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 FSBPO95073 299 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 APOA4P06727 396 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 NCF1P14598 390 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 RTP1P59025 263 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 MRPS35P82673 323 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 PTPN20Q4JDL3 420 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 CPNE8Q86YQ8 564 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ATP6V0D2Q8N8Y2 350 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 LENG9Q96B70 501 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 KLRG1Q96E93 195 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 MYH2Q9UKX2 1941 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 FAM208AQ9UK61 1670 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 TMEM191CA6NGB0 347 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 AVILO75366 819 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 DNAJC8O75937 253 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ERVK-10P10266 1014 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 SLC2A3P11169 496 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 KCNJ2P63252 427 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 INPP5AQ14642 412 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 MTFR1Q15390 333 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 TREML2Q5T2D2 321 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 WSCD1Q658N2 575 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 SETD3Q86TU7 594 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 RNF157Q96PX1 679 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 GPAMQ9HCL2 828 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 UTP6Q9NYH9 597 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 SNX5Q9Y5X3 404 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ARHGAP10A1A4S6 786 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ABCE1P61221 599 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 MRNIPQ6NTE8 343 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 PIGZQ86VD9 579 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 DEFB107AQ8IZN7 70 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 LRRC15Q8TF66 581 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 APBA2Q99767 749 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 ETNK2Q9NVF9 386 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 STX18Q9P2W9 335 aaKnown RBP14.82□□□□□ -0.04
SCARB2-216ENST00000639300 TAGLN3Q9UI15 199 aa14.82□□□□□ -0.04
SCARB2-216ENST00000639300 SRP72O76094 671 aaKnown RBP14.81□□□□□ -0.04
SCARB2-216ENST00000639300 HIST1H2AGP0C0S8 130 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-216ENST00000639300 THRAP10827 490 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 HIST1H2ADP20671 130 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 BDNFP23560 247 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 JAM2P57087 298 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 CTXN3Q4LDR2 81 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 DAW1Q8N136 415 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 CATSPER1Q8NEC5 780 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 CENPTQ96BT3 561 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 NAF1Q96HR8 494 aaKnown RBP14.81□□□□□ -0.04
SCARB2-216ENST00000639300 HIST1H2AHQ96KK5 128 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 SENP8Q96LD8 212 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 HIST1H2AJQ99878 128 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 H2AFJQ9BTM1 129 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 EFCAB1Q9HAE3 211 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 DMAC2Q9NW81 257 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 A0A1W2PPM1 405 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 ARF4P18085 180 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-216ENST00000639300 STX5Q13190 355 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 DCUN1D1Q96GG9 259 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 SPATA17Q96L03 361 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 CNTFP26441 200 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 MFSD10Q14728 455 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 ASTE1Q2TB18 679 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-216ENST00000639300 CNPY4Q8N129 248 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 SIX2Q9NPC8 291 aa14.81□□□□□ -0.04
SCARB2-216ENST00000639300 DPYSL4O14531 572 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 FARP2O94887 1054 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 SLC1A6P48664 564 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PLK1P53350 603 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TBCCQ15814 346 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CLEC4DQ8WXI8 215 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 OXNAD1Q96HP4 312 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PPP1R2P1Q96PQ5 205 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 SH3GL2Q99962 352 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 B3GNT5Q9BYG0 378 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 ASPSCR1Q9BZE9 553 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PIDD1Q9HB75 910 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TRPC5OSA6NMA1 111 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 PHGDHO43175 533 aaKnown RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TRUB2O95900 331 aaKnown RBP14.8□□□□□ -0.04
SCARB2-216ENST00000639300 CCR1P32246 355 aa14.8□□□□□ -0.04
SCARB2-216ENST00000639300 TTC23LQ6PF05 361 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms