RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 TM9SF3Q9HD45 589 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ANAPC4Q9UJX5 808 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 PADI4Q9UM07 663 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 FOXO6A8MYZ6 492 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 IPO13O94829 963 aaKnown RBP4.57□□□□□ -1.68
GABRA1-220ENST00000638159 AGXTP21549 392 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 GCKP35557 465 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 CCL11P51671 97 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 MRPS9P82933 396 aaKnown RBP4.57□□□□□ -1.68
GABRA1-220ENST00000638159 FOLH1Q04609 750 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 IGFBP7Q16270 282 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TXNDC11Q6PKC3 985 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 HPS6Q86YV9 775 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 MFN1Q8IWA4 741 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 CARNMT1Q8N4J0 409 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ESX1Q8N693 406 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 CXorf40AQ8TE69 158 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TTC25Q96NG3 672 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ZNF559Q9BR84 538 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 EXO5Q9H790 373 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 CHST7Q9NS84 486 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 LRWD1Q9UFC0 647 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 KLHL3Q9UH77 587 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 SATB2Q9UPW6 733 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 PRAMEF26H0Y7S4 382 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 SCAMP1O15126 338 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 NEMFO60524 1076 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TACC1O75410 805 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TCEA3O75764 348 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 IL18RAPO95256 599 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ITGA2BP08514 1039 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 CXCR2P25025 360 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 FCHO2Q0JRZ9 810 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TCTN1Q2MV58 587 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 SLC10A6Q3KNW5 377 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ZFYVE27Q5T4F4 411 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 TAS1R1Q7RTX1 841 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 UBXN4Q92575 508 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 EIF2AQ9BY44 585 aaKnown RBP4.57□□□□□ -1.68
GABRA1-220ENST00000638159 HPS4Q9NQG7 708 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 HCN2Q9UL51 889 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 ABCA7Q8IZY2 2146 aa4.57□□□□□ -1.68
GABRA1-220ENST00000638159 INTS1Q8N201 2190 aaKnown RBP4.57□□□□□ -1.68
GABRA1-220ENST00000638159 IGKV6D-41A0A0C4DH26 115 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 K7ENP7 123 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PIK3CDO00329 1044 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SGSM2O43147 1006 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DLX3O60479 287 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ABOP16442 354 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 RABIFP47224 123 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 RAB15P59190 212 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 KRT83P78385 493 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 RTP5Q14D33 572 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CYP2A13Q16696 494 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 EIF2S3LQ2VIR3 472 aaKnown RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 FOXD4L6Q3SYB3 417 aaPredicted RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ZNF667Q5HYK9 610 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 MDH1BQ5I0G3 518 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 INO80CQ6PI98 192 aaPredicted RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 FOXD4L3Q6VB84 417 aaPredicted RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 LRRC55Q6ZSA7 311 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DAAM2Q86T65 1068 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CHSY1Q86X52 802 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 UNC45BQ8IWX7 931 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ADGRF2Q8IZF7 708 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PLEKHO2Q8TD55 490 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 APOBEC3BQ9UH17 382 aaKnown RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ARHGAP26Q9UNA1 814 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 NFE2L3Q9Y4A8 694 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 A0A1B0GTQ1 180 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DYTNA2CJ06 578 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PABPN1LA6NDY0 278 aaKnown RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 POLR1CO15160 346 aaPredicted RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DEXIO95424 95 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ITGB5P18084 799 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SCP2P22307 547 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ATICP31939 592 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SLC8A1P32418 973 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 KRT2P35908 639 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PRPHP41219 470 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PSEN1P49768 467 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CDR1P51861 262 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 E2F4Q16254 413 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DDR2Q16832 855 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 LONRF1Q17RB8 773 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 TSR1Q2NL82 804 aaKnown RBP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SLC8B1Q6J4K2 584 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SLCO6A1Q86UG4 719 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 ZNF687Q8N1G0 1237 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 SDR16C5Q8N3Y7 309 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CLEC1AQ8NC01 280 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 TMEM40Q8WWA1 233 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 C17orf62Q9BQA9 187 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CLPBQ9H078 707 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.56□□□□□ -1.68
GABRA1-220ENST00000638159 MUC3BQ9H195 1237 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 PLEKHA5Q9HAU0 1116 aa4.56□□□□□ -1.68
GABRA1-220ENST00000638159 DONSONQ9NYP3 566 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms