RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 ZNF669Q96BR6 464 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 ARL2BPQ9Y2Y0 163 aa16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 SAC3D1A6NKF1 404 aa16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 PSIP1O75475 530 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 ACO1P21399 889 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 PAICSP22234 425 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 GAS2L1Q99501 681 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-258ENST00000638029 TGM2P21980 687 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 NRDE2Q9H7Z3 1164 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 SNX13Q9Y5W8 968 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 GTPBP1O00178 669 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 KCTD21Q4G0X4 260 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RASSF6Q6ZTQ3 369 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 DPY30Q9C005 99 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 SPG21Q9NZD8 308 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 DSEQ9UL01 958 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 TET3O43151 1660 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CYB561D2O14569 222 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 ACADSBP45954 432 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RAP1GAPP47736 663 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 APOL2Q9BQE5 337 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 UBXN6Q9BZV1 441 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 MRPS7Q9Y2R9 242 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 NR2E3Q9Y5X4 410 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 TTC26A0AVF1 554 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 FOXP2O15409 715 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CAPSLQ8WWF8 208 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RSPH1Q8WYR4 309 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 MAGEB2O15479 319 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 NCK1P16333 377 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 LGALS3BPQ08380 585 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 OR2W6PQ8NHA6 318 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 ZKSCAN4Q969J2 545 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CDADC1Q9BWV3 514 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RMND5AQ9H871 391 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CERS4Q9HA82 394 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 RHOAP61586 193 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CYP4F2P78329 520 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CYP4F3Q08477 520 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 SNRNP35Q16560 246 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 TRPM8Q7Z2W7 1104 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 USP13Q92995 863 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 CGRRF1Q99675 332 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 PDGFDQ9GZP0 370 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 WDR35Q9P2L0 1181 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
CACNA1A-258ENST00000638029 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CNTNAP2Q9UHC6 1331 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 STILQ15468 1287 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 PRR23BQ6ZRT6 265 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 GUF1Q8N442 669 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 MIEF2Q96C03 454 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 LRRC4BQ9NT99 713 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 GULP1Q9UBP9 304 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 SPEF1Q9Y4P9 236 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CCND1P24385 295 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 PIK3R1P27986 724 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 NFYCQ13952 458 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 FAM83EQ2M2I3 478 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 FAR1Q8WVX9 515 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 C1QTNF7Q9BXJ2 289 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 ADGRE3Q9BY15 652 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 ING3Q9NXR8 418 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 ERCC2P18074 760 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 GTF2H1P32780 548 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 PTAR1Q7Z6K3 402 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 KLHL12Q53G59 568 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 KRT35Q92764 455 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 KCTD14Q9BQ13 255 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 GOLPH3Q9H4A6 298 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 PSMD9O00233 223 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 KPNA5O15131 536 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 EPHA7Q15375 998 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 OTUD3Q5T2D3 398 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 TRNT1Q96Q11 434 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CNOT3O75175 753 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CSDE1O75534 798 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 PRKCEQ02156 737 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 LPAR1Q92633 364 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CCT8L2Q96SF2 557 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 ZDHHC6Q9H6R6 413 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 CAB39LQ9H9S4 337 aa16.73■□□□□ 0.27
CACNA1A-258ENST00000638029 OVOS2A0A0G2JMS6 1433 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
CACNA1A-258ENST00000638029 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms