RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 APBA2Q99767 749 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 LPIN3Q9BQK8 851 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 NAT9Q9BTE0 207 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 TUBB6Q9BUF5 446 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 TRIM55Q9BYV6 548 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 EIF2B3Q9NR50 452 aaKnown RBP12.54□□□□□ -0.4
CLN8-212ENST00000637083 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 RRN3Q9NYV6 651 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 DTLQ9NZJ0 730 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
CLN8-212ENST00000637083 C2CD2LO14523 706 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 GABRDO14764 452 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 AVILO75366 819 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 UNC5CO95185 931 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 TGDSO95455 350 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 IL1BP01584 269 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 AKR1A1P14550 325 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 TFE3P19532 575 aaPredicted RBP12.53□□□□□ -0.4
CLN8-212ENST00000637083 AMPD1P23109 780 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 GLUD2P49448 558 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 NEK3P51956 506 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 HUNKP57058 714 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 CCL14Q16627 93 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 DCAF6Q58WW2 860 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 ANKRD20A2Q5SQ80 823 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 FAXCQ5TGI0 409 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 ANKRD20A1Q5TYW2 823 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 ANKRD20A3Q5VUR7 823 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 OTOAQ7RTW8 1153 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 OSTM1Q86WC4 334 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 CDKL2Q92772 493 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 OLFM3Q96PB7 478 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 PPP1R10Q96QC0 940 aaKnown RBP12.53□□□□□ -0.4
CLN8-212ENST00000637083 NPY6RQ99463 290 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 ARHGEF3Q9NR81 526 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 MKS1Q9NXB0 559 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 GJD2Q9UKL4 321 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 GRID1Q9ULK0 1009 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
CLN8-212ENST00000637083 TRIM49D1C9J1S8 452 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 GOLGA8RI6L899 631 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 CAPN9O14815 690 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 HCRTO43612 131 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 METTL18O95568 372 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 DHRS4L1P0CG22 281 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 GOT1P17174 413 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 CYP2B6P20813 491 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.4
CLN8-212ENST00000637083 PURAQ00577 322 aaKnown RBP12.52□□□□□ -0.4
CLN8-212ENST00000637083 DEUP1Q05D60 604 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 SLC10A2Q12908 348 aaPredicted RBP12.52□□□□□ -0.4
CLN8-212ENST00000637083 MTM1Q13496 603 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 FAM228AQ86W67 206 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 FAM131BQ86XD5 332 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 INPP5DQ92835 1189 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 WNT8BQ93098 351 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 NTAN1Q96AB6 310 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 SIGLEC10Q96LC7 697 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 SLC2A13Q96QE2 648 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.4
CLN8-212ENST00000637083 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 PTCH2Q9Y6C5 1203 aa12.52□□□□□ -0.4
CLN8-212ENST00000637083 M0QYT0 321 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 KLF11O14901 512 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 NCAM2O15394 837 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 THP07101 528 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 PYGBP11216 843 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 PAX3P23760 479 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 ATXN1P54253 815 aaKnown RBP12.52□□□□□ -0.41
CLN8-212ENST00000637083 BEX3Q00994 111 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 MGAT5Q09328 741 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 NAB1Q13506 487 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 ARL13BQ3SXY8 428 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 LRRC8BQ6P9F7 803 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
CLN8-212ENST00000637083 BNIPLQ7Z465 357 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 C10orf82Q8WW14 230 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 STAMBPL1Q96FJ0 436 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 MTG1Q9BT17 334 aaPredicted RBP12.52□□□□□ -0.41
CLN8-212ENST00000637083 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 CNGB3Q9NQW8 809 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 ARHGEF4Q9NR80 690 aa12.52□□□□□ -0.41
CLN8-212ENST00000637083 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
CLN8-212ENST00000637083 CENPFP49454 3210 aa12.51□□□□□ -0.41
CLN8-212ENST00000637083 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
CLN8-212ENST00000637083 FAM159BA6NKW6 160 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms