RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NIF3L1Q9GZT8 377 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 KLHL31Q9H511 634 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 MPP6Q9NZW5 540 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ADGRL2O95490 1459 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 SCN2BO60939 215 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 PSMA4P25789 261 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 RANBP17Q9H2T7 1088 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF112Q9UJU3 913 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 SEC22BO75396 215 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 RIPOR1Q6ZS17 1223 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ST13P5Q8NFI4 369 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 BHLHE41Q9C0J9 482 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 GPAMQ9HCL2 828 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 SH3GLB1Q9Y371 365 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 FAM187AA6NFU0 413 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 FAM25EA8MYX2 175 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 INPP4BO15327 924 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 TLL1O43897 1013 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF354BQ96LW1 612 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 MYLK2Q9H1R3 596 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 TPD52L2O43399 206 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SRP54P61011 504 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 BMPR2Q13873 1038 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CCDC144BQ3MJ40 725 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SETD6Q8TBK2 473 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 GAS2L1Q99501 681 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CTNNAL1Q9UBT7 734 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 IRX1P78414 480 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 MILR1Q7Z6M3 343 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SIKE1Q9BRV8 207 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 TMEM121Q9BTD3 319 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 C6orf62Q9GZU0 229 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CHKBQ9Y259 395 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 FGFR3P22607 806 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 OTUD3Q5T2D3 398 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 TDRD5Q8NAT2 981 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 HMX1Q9NP08 348 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 OSER1Q9NX31 292 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SNRPAP09012 282 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 ARP10275 920 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SERPINB1P30740 379 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 TUBP50607 506 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CUL2Q13617 745 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SIRT2Q8IXJ6 389 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 TMEM8AQ9HCN3 771 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 VANGL2Q9ULK5 521 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 TBX4P57082 545 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SEC16BQ96JE7 1060 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 STON1Q9Y6Q2 735 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CFAP74Q9C0B2 1584 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 CYP2A7P20853 494 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 GRIK4Q16099 956 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 RSBN1Q5VWQ0 802 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF621Q6ZSS3 439 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 DPY30Q9C005 99 aa18.28■□□□□ 0.52
CACNA1A-227ENST00000636549 SLC25A12O75746 678 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 CRTAMO95727 393 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 RPL10AP62906 217 aaKnown RBP18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 PTSQ03393 145 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 MADCAM1Q13477 382 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 TKFCQ3LXA3 575 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 LINC00523Q86TU6 105 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 CHST13Q8NET6 341 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 COQ7Q99807 217 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 POLR1BQ9H9Y6 1135 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 OR10H1Q9Y4A9 318 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 IGSF9BQ9UPX0 1349 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 DDX3XO00571 662 aaKnown RBP eCLIP18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 RAD51CO43502 376 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 HS6ST1O60243 411 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 PSMB9P28065 219 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 MFSD10Q14728 455 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 OVOS1Q6IE37 1185 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 SPOCD1Q6ZMY3 1216 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 JMJD4Q9H9V9 463 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 ABCG1P45844 678 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 ARID3BQ8IVW6 561 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 MB21D2Q8IYB1 491 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 FBXO36Q8NEA4 188 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 LPPQ93052 612 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 CARD9Q9H257 536 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 RSAD1Q9HA92 442 aa18.27■□□□□ 0.52
CACNA1A-227ENST00000636549 GTPBP1O00178 669 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 PGK1P00558 417 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 CALCAP01258 141 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 CEBPGP53567 150 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 STILQ15468 1287 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 KCTD19Q17RG1 926 aaPredicted RBP18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 RPTNQ6XPR3 784 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 C10orf88Q9H8K7 445 aa18.27■□□□□ 0.51
CACNA1A-227ENST00000636549 DENND1CQ8IV53 801 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms