RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 PDE4CQ08493 712 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 MMRN1Q13201 1228 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 DPYSL3Q14195 570 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 MRPL58Q14197 206 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 FASTKD3Q14CZ7 662 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 FAM109BQ6ICB4 259 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 C6orf89Q6UWU4 347 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 ZDHHC17Q8IUH5 632 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RNF168Q8IYW5 571 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 ZBED8Q8IZ13 594 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 CACNA2D3Q8IZS8 1091 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 SEC16BQ96JE7 1060 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RAD9AQ99638 391 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 HNRNPABQ99729 332 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 PHACTR1Q9C0D0 580 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RASSF4Q9H2L5 321 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 EURLQ9NYK6 297 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 TBK1Q9UHD2 729 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 NR2E3Q9Y5X4 410 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 EXOC1LA0A1B0GW35 172 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 ARHGEF37A1IGU5 675 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RBP3P10745 1247 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 CREB1P16220 341 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 DESP17661 470 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 LAG3P18627 525 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 SDC4P31431 198 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RPL22P35268 128 aaKnown RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RABGGTBP53611 331 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 TFDP2Q14188 446 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 SHHQ15465 462 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 HIF1AQ16665 826 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 MAP7D3Q8IWC1 876 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 UNC45BQ8IWX7 931 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 CYP4X1Q8N118 509 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 THEM5Q8N1Q8 247 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 FIBCD1Q8N539 461 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 ANKRD52Q8NB46 1076 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 RHOBTB2Q9BYZ6 727 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
CHRNA7-212ENST00000636271 GRXCR1A8MXD5 290 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 TLL1O43897 1013 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 BEST1O76090 585 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 PDIA2Q13087 525 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 IFT88Q13099 833 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 KRT81Q14533 505 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 PDK2Q15119 407 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 NOMO1Q15155 1222 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 BOLA3Q53S33 107 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 HP1BP3Q5SSJ5 553 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 PRSS55Q6UWB4 352 aaPredicted RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 OTUD6BQ8N6M0 293 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 NAT8LQ8N9F0 302 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 FAM71DQ8N9W8 422 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 FAM172AQ8WUF8 416 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 CPT1BQ92523 772 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 P3H4Q92791 437 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 TTPALQ9BTX7 342 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 NGRNQ9NPE2 291 aaKnown RBP16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 ACTL7BQ9Y614 415 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
CHRNA7-212ENST00000636271 CHD7Q9P2D1 2997 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 FOXO6A8MYZ6 492 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 GOLGA8MH3BSY2 632 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 GABBR2O75899 941 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 BRAFP15056 766 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 MYOGP15173 224 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 IFNAR2P48551 515 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 BCAT1P54687 386 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 CTXN3Q4LDR2 81 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 SPRED2Q7Z698 418 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 SP7Q8TDD2 431 aaPredicted RBP16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 TEKT4Q8WW24 435 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 DYDC1Q8WWB3 177 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 MYLPFQ96A32 169 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 CABS1Q96KC9 395 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 RNF157Q96PX1 679 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 VPS37BQ9H9H4 285 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 KCNK9Q9NPC2 374 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 SPG21Q9NZD8 308 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 SMAPO00193 183 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 ARL4CP56559 192 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 ROR1Q01973 937 aa16.24■□□□□ 0.19
CHRNA7-212ENST00000636271 BST2Q10589 180 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms