RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 CTAGE1Q96RT6 745 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 NELL2Q99435 816 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 P2RX7Q99572 595 aaKnown RBP3.7□□□□□ -1.82
VPS8-228ENST00000628962 CNPPD1Q9BV87 410 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 STK33Q9BYT3 514 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 MAGEH1Q9H213 219 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 STK32BQ9NY57 414 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 DACT1Q9NYF0 836 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 MYO1AQ9UBC5 1043 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 ADAMTS5Q9UNA0 930 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 ADAMTS12P58397 1594 aa3.7□□□□□ -1.82
VPS8-228ENST00000628962 RIMS1Q86UR5 1692 aaKnown RBP3.7□□□□□ -1.82
VPS8-228ENST00000628962 UHRF1BP1LA0JNW5 1464 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 GOLGA6L3A6NEY3 463 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 ZNF785A8K8V0 405 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 GTPBP1O00178 669 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 EIF3FO00303 357 aaPredicted RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 ACKR2O00590 384 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PODXLO00592 558 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 HNRNPDLO14979 420 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 SMAD6O43541 496 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 TBC1D4O60343 1298 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 TOM1O60784 492 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 AHSGP02765 367 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PYGLP06737 847 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 ANXA2P07355 339 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 GJB1P08034 283 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 MYL4P12829 197 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 CHRM3P20309 590 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PIK3CGP48736 1102 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 CLCN2P51788 898 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 ARL4CP56559 192 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 SOX8P57073 446 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PSMC1P62191 440 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 GALNT1Q10472 559 aaPredicted RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 POSTNQ15063 836 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 HYIQ5T013 277 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 CYP26C1Q6V0L0 522 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 KRBA2Q6ZNG9 492 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PIP4P1Q86T03 277 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PPP1R3BQ86XI6 285 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PDILTQ8N807 584 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PCSK9Q8NBP7 692 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 IL17REQ8NFR9 667 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 USP13Q92995 863 aaPredicted RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 NMD3Q96D46 503 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 SNX22Q96L94 193 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 UBXN10Q96LJ8 280 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PPM1MQ96MI6 270 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 TRIM54Q9BYV2 358 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 MRPL46Q9H2W6 279 aaKnown RBP3.69□□□□□ -1.82
VPS8-228ENST00000628962 BRD9Q9H8M2 597 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 OBP2BQ9NPH6 170 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 SLAMF7Q9NQ25 335 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 ITM2CQ9NQX7 267 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 GJB4Q9NTQ9 266 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 COL20A1Q9P218 1284 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 CFAP97Q9P2B7 532 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PROCRQ9UNN8 238 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 AGAP1Q9UPQ3 857 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 PAXBP1Q9Y5B6 917 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS8-228ENST00000628962 KDM5BQ9UGL1 1544 aa3.69□□□□□ -1.82
VPS8-228ENST00000628962 TNIKQ9UKE5 1360 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 A0A1B0GVC2 190 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 TRIM43BA6NCK2 446 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 LGALS16A8MUM7 142 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 PRSS44E7EML9 344 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 SYT5O00445 386 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 BTN3A1O00481 513 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 ADAM10O14672 748 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 USP1O94782 785 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 MBD4O95243 580 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 GNAI3P08754 354 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 NPSP0C0P6 89 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 VEGFAP15692 232 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 PRDX5P30044 214 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 GCLCP48506 637 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 ZNF135P52742 658 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 ITGA8P53708 1063 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 GNAI1P63096 354 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 SETQ01105 290 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 EXOSC9Q06265 439 aaKnown RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 SLC13A2Q13183 592 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 G3BP1Q13283 466 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS8-228ENST00000628962 TAF5Q15542 800 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 CERKLQ49MI3 558 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 KIRREL2Q6UWL6 708 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 RNF44Q7L0R7 432 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 PARS2Q7L3T8 475 aaKnown RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 GALNT15Q8N3T1 639 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 RP9Q8TA86 221 aaKnown RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 TRIM43Q96BQ3 446 aaPredicted RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 C18orf8Q96DM3 657 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 DAZAP1Q96EP5 407 aaKnown RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 SEC62Q99442 399 aaKnown RBP3.68□□□□□ -1.82
VPS8-228ENST00000628962 FAM167BQ9BTA0 163 aa3.68□□□□□ -1.82
VPS8-228ENST00000628962 C1orf43Q9BWL3 253 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms