RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	KATNA1	O75449	491 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SKAP2	O75563	359 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	TNKS	O95271	1327 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SCGB1D2	O95969	90 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SLC4A1	P02730	911 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PYGL	P06737	847 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	TPM1	P09493	284 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	NDUFB7	P17568	137 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	CHML	P26374	656 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	S100A5	P33763	92 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PTGER1	P34995	402 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PEX5	P50542	639 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	MNAT1	P51948	309 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	TMEM94	Q12767	1356 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	KLF9	Q13886	244 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	BOP1	Q14137	746 aa	Known RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	TTC31	Q49AM3	519 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	TMEM119	Q4V9L6	283 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	RILPL1	Q5EBL4	403 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	GPRASP1	Q5JY77	1395 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	ISM2	Q6H9L7	571 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	LVRN	Q6Q4G3	990 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	BTN2A1	Q7KYR7	527 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SLC29A4	Q7RTT9	530 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	CCDC186	Q7Z3E2	898 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	MAVS	Q7Z434	540 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	MAATS1	Q7Z4T9	603 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	SPATA21	Q7Z572	469 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	LURAP1L	Q8IV03	231 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PRR18	Q8N4B5	295 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	LINC00469	Q8N7U9	141 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	GBP7	Q8N8V2	638 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	ACMSD	Q8TDX5	336 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	RPL36AL	Q969Q0	106 aa	Known RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	ATP6V1E2	Q96A05	226 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	RGMA	Q96B86	450 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	EPSTI1	Q96J88	318 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	CLMN	Q96JQ2	1002 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	VCX3B	Q9H321	246 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	AASDHPPT	Q9NRN7	309 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	STK39	Q9UEW8	545 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PCDHA3	Q9Y5H8	950 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	CGNL1	Q0VF96	1302 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ALG1L2	C9J202	215 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ADAMTS3	O15072	1205 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TLR5	O60602	858 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	DTNB	O60941	627 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	VPS4B	O75351	444 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	MOSPD3	O75425	235 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ZNF189	O75820	626 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	STAMBP	O95630	424 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PAH	P00439	452 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	GNAI2	P04899	355 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PDHA1	P08559	390 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	IL6R	P08887	468 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PIM1	P11309	404 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	KRT10	P13645	584 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	KRT13	P13646	458 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PECAM1	P16284	738 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PDC	P20941	246 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TMOD1	P28289	359 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PPIF	P30405	207 aa	Known RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	USP8	P40818	1118 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	HAL	P42357	657 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PHKA1	P46020	1223 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	POLD2	P49005	469 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	CENPA	P49450	140 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	CLCN2	P51788	898 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	CCNH	P51946	323 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ZNF134	P52741	427 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TPD52	P55327	224 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	STK3	Q13188	491 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	MORC3	Q14149	939 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TNIP1	Q15025	636 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	SYCP1	Q15431	976 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PTPN21	Q16825	1174 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	BOLA3	Q53S33	107 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	MEX3C	Q5U5Q3	659 aa	Known RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	EMC10	Q5UCC4	262 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	FAM160B1	Q5W0V3	765 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	SWSAP1	Q6NVH7	229 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ATF7IP	Q6VMQ6	1270 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	MMS22L	Q6ZRQ5	1243 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	HEATR3	Q7Z4Q2	680 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	USP37	Q86T82	979 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	PPP1R3B	Q86XI6	285 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TEX11	Q8IYF3	940 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	MIER2	Q8N344	545 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	CFAP36	Q96G28	342 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	RBM18	Q96H35	190 aa	Known RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	C8orf76	Q96K31	380 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	FAM167A	Q96KS9	214 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	ZNF48	Q96MX3	618 aa	Predicted RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	RBM14	Q96PK6	669 aa	Known RBP	4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	WAC	Q9BTA9	647 aa		4.07	□□□□□ -1.76
UBE2A-208	ENST00000628734	TSGA10	Q9BZW7	698 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms