RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 PSTKQ8IV42 348 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 KIRREL3Q8IZU9 778 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 KCTD6Q8NC69 237 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 NT5C3BQ969T7 300 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 FLRT1Q9NZU1 646 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 RCOR3Q9P2K3 495 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 TSPAN16Q9UKR8 245 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 FAM159BA6NKW6 160 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 M0QYV0 167 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 DGKIO75912 1065 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 RNF8O76064 485 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 MAP3K6O95382 1288 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 ATP5BP06576 529 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 HOXA11P31270 313 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 YWHAGP61981 247 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 SLC6A3Q01959 620 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 CACNB2Q08289 660 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 FRG1Q14331 258 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 KRT72Q14CN4 511 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 LVRNQ6Q4G3 990 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 SLC26A9Q7LBE3 791 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 ZC3H18Q86VM9 953 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 PDIK1LQ8N165 341 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 CRYBG2Q8N1P7 616 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 SPATA18Q8TC71 538 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 AGAP11Q8TF27 550 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 RXFP2Q8WXD0 754 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 SERAC1Q96JX3 654 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 ADPGKQ9BRR6 497 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 SLCO1B3Q9NPD5 702 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 GDAP2Q9NXN4 497 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 DPP3Q9NY33 737 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 PCDHGB7Q9Y5F8 929 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 NLRC5Q86WI3 1866 aa7.43□□□□□ -1.22
CTNNA1-244ENST00000627109 A0A087WZ62 844 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 E5RJQ4 531 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 H7C0C1 242 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 DLDP09622 509 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 CCND3P30281 292 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ATP5OP48047 213 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 NR2C2P49116 596 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 HDAC4P56524 1084 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SEMA5AQ13591 1074 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 GRB14Q14449 540 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SMAD1Q15797 465 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 TEX44Q53QW1 395 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 RAB6CQ53S08 254 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 FAM71DQ8N9W8 422 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 QKIQ96PU8 341 aaKnown RBP eCLIP7.42□□□□□ -1.227e-7■■■■■ 30.1
CTNNA1-244ENST00000627109 RAB3IPQ96QF0 476 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 FDXACB1Q9BRP7 624 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 NT5C1AQ9BXI3 368 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MCOLN1Q9GZU1 580 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 RAB6CQ9H0N0 254 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 UNC93B1Q9H1C4 597 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 EIF2B3Q9NR50 452 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 HESX1Q9UBX0 185 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 L3MBTL1Q9Y468 752 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MBLAC1A4D2B0 266 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 GPR32O75388 356 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 GRAP2O75791 330 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 IGHA2P01877 340 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 L1CAMP32004 1257 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ELK3P41970 407 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ADAM17P78536 824 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MMRN1Q13201 1228 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SESTD1Q86VW0 696 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 KLHDC8BQ8IXV7 354 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 OR6J1Q8NGC5 347 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 TCP10LQ8TDR4 215 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 C7orf26Q96N11 449 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MOCS1Q9NZB8 636 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SIRPGQ9P1W8 387 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 TRIM33Q9UPN9 1127 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 IQANK1A0A1B0GTG1 560 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 HMX2A2RU54 273 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 PIRO00625 290 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 SNNO75324 88 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 RFPL1O75677 317 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MLNP12872 115 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ATP2A2P16615 1042 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ADRA1DP25100 572 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 WASHC2DQ5SRD0 308 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 FAM102AQ5T9C2 384 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 PMF1Q6P1K2 205 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 NPNTQ6UXI9 565 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 CLNKQ7Z7G1 428 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 PTPRN2Q92932 1015 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ISL2Q96A47 359 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 ERP27Q96DN0 273 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 MTBPQ96DY7 904 aa7.42□□□□□ -1.22
CTNNA1-244ENST00000627109 RSRC1Q96IZ7 334 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms