RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 DAB2IPQ5VWQ8 1189 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 MSANTD2Q6P1R3 559 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 KLHDC10Q6PID8 442 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CMTM8Q8IZV2 173 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CCAR2Q8N163 923 aaKnown RBP8.87□□□□□ -0.99
SGMS1-211ENST00000626236 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.87□□□□□ -0.99
SGMS1-211ENST00000626236 ZSCAN18Q8TBC5 510 aaPredicted RBP8.87□□□□□ -0.99
SGMS1-211ENST00000626236 FNIP1Q8TF40 1166 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 RNF34Q969K3 372 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 NT5C3BQ969T7 300 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 SERPINB11Q96P15 392 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CNPY3Q9BT09 278 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 RAB6CQ9H0N0 254 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 PIGVQ9NUD9 493 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 DDIT4Q9NX09 232 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.87□□□□□ -0.99
SGMS1-211ENST00000626236 GDE1Q9NZC3 331 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CALCOCO1Q9P1Z2 691 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 IP6K2Q9UHH9 426 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 LCMT1Q9UIC8 334 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 ZMYM5Q9UJ78 669 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CDH7Q9ULB5 785 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 CPQQ9Y646 472 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 PRUNE2Q8WUY3 3088 aa8.87□□□□□ -0.99
SGMS1-211ENST00000626236 DOCK8Q8NF50 2099 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 USP27XA6NNY8 438 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 IRAK2O43187 625 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 BUB1BO60566 1050 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 RNF8O76064 485 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 PROSCO94903 275 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 PRAMEF12O95522 483 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 F9P00740 461 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 IGLV3-25P01717 112 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 SSR1P43307 286 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 ATXN1P54253 815 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 HADHBP55084 474 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 TBX4P57082 545 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 SLC7A9P82251 487 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 COG7P83436 770 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 TRIP4Q15650 581 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 FAM78AQ5JUQ0 283 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 SCYL2Q6P3W7 929 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 ZNF662Q6ZS27 426 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 STRADAQ7RTN6 431 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 DAAM2Q86T65 1068 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 REXO1L1PQ8IX06 675 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 C17orf53Q8N3J3 647 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 RNF10Q8N5U6 811 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 NIPA2Q8N8Q9 360 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 CENPIQ92674 756 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 USP13Q92995 863 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 MYADMQ96S97 322 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
SGMS1-211ENST00000626236 GKN1Q9NS71 199 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 TDP1Q9NUW8 608 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 ARHGAP26Q9UNA1 814 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 CCL26Q9Y258 94 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 TLR6Q9Y2C9 796 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
SGMS1-211ENST00000626236 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 LEFTY2O00292 366 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 LRCH4O75427 683 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 PALMO75781 387 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ENDOD1O94919 500 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 MOCS2O96007 188 aaPredicted RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 APOEP02649 317 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 LAMP2P13473 410 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 WEE1P30291 646 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 CORO1AP31146 461 aaKnown RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 MAN1A1P33908 653 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 VIPR2P41587 438 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 KCNQ1P51787 676 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 KPNA1P52294 538 aaPredicted RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 HDAC4P56524 1084 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ZXDBP98169 803 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 NNTQ13423 1086 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ACAP1Q15027 740 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 SMAD2Q15796 467 aaKnown RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ZC3H12AQ5D1E8 599 aaKnown RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 C11orf63Q6NUN7 778 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 CC2D1AQ6P1N0 951 aaPredicted RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 OTOP3Q7RTS5 596 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 BNIPLQ7Z465 357 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 FAM131BQ86XD5 332 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 DDX42Q86XP3 938 aaKnown RBP eCLIP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 CPNE8Q86YQ8 564 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ARID3BQ8IVW6 561 aaPredicted RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ARFGAP1Q8N6T3 406 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 TDRD5Q8NAT2 981 aaKnown RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 ST13P5Q8NFI4 369 aaPredicted RBP8.85□□□□□ -0.99
SGMS1-211ENST00000626236 KIAA1524Q8TCG1 905 aa8.85□□□□□ -0.99
SGMS1-211ENST00000626236 SH3RF2Q8TEC5 729 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms