RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 MYD88Q99836 296 aa3.9□□□□□ -1.78
VBP1-204ENST00000625964 EFHD1Q9BUP0 239 aa3.9□□□□□ -1.78
VBP1-204ENST00000625964 CINPQ9BW66 212 aaPredicted RBP3.9□□□□□ -1.78
VBP1-204ENST00000625964 EIF2AQ9BY44 585 aaKnown RBP3.9□□□□□ -1.78
VBP1-204ENST00000625964 PDGFCQ9NRA1 345 aa3.9□□□□□ -1.78
VBP1-204ENST00000625964 TRNAU1APQ9NX07 287 aaKnown RBP3.9□□□□□ -1.78
VBP1-204ENST00000625964 ZMYND8Q9ULU4 1186 aaPredicted RBP3.9□□□□□ -1.78
VBP1-204ENST00000625964 PCDHGB2Q9Y5G2 931 aa3.9□□□□□ -1.78
VBP1-204ENST00000625964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.9□□□□□ -1.79
VBP1-204ENST00000625964 E5RJQ4 531 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 ZSCAN9O15535 394 aaPredicted RBP3.9□□□□□ -1.79
VBP1-204ENST00000625964 KCNQ3O43525 872 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 PLIN1O60240 522 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 PRAMEF2O60811 474 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 PECAM1P16284 738 aaPredicted RBP3.9□□□□□ -1.79
VBP1-204ENST00000625964 EEF1GP26641 437 aaKnown RBP3.9□□□□□ -1.79
VBP1-204ENST00000625964 SLC5A2P31639 672 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 PBX1P40424 430 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 ARHGAP25P42331 645 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 GPC5P78333 572 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 CFHR3Q02985 330 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 CCDC15Q0P6D6 951 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 MTAPQ13126 283 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 FHL3Q13643 280 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 ZNF268Q14587 947 aaPredicted RBP3.9□□□□□ -1.79
VBP1-204ENST00000625964 MFSD13AQ14CX5 517 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 ACOX1Q15067 660 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 MAP9Q49MG5 647 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 ARHGAP15Q53QZ3 475 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 TMEM63BQ5T3F8 832 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 VSTM1Q6UX27 236 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 KIAA0408Q6ZU52 694 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 SRLQ86TD4 932 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 CCDC146Q8IYE0 955 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.9□□□□□ -1.79
VBP1-204ENST00000625964 FAM71DQ8N9W8 422 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 GLIS1Q8NBF1 620 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 BRI3BPQ8WY22 251 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 KLHL13Q9P2N7 655 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 NOTCH4Q99466 2003 aa3.9□□□□□ -1.79
VBP1-204ENST00000625964 CLIC1O00299 241 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 PODXLO00592 558 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 FYB1O15117 783 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 BCAR3O75815 825 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 IFIT2P09913 472 aaKnown RBP3.89□□□□□ -1.79
VBP1-204ENST00000625964 TMIGD3P0DMS9 266 aaPredicted RBP3.89□□□□□ -1.79
VBP1-204ENST00000625964 EGR1P18146 543 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 GALNSP34059 522 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 DGKQP52824 942 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 BFSP2Q13515 415 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 SLC5A9Q2M3M2 681 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 P3H1Q32P28 736 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 AASDHQ4L235 1098 aaPredicted RBP3.89□□□□□ -1.79
VBP1-204ENST00000625964 C16orf71Q8IYS4 520 aaPredicted RBP3.89□□□□□ -1.79
VBP1-204ENST00000625964 NRACQ8N912 160 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 KIAA1191Q96A73 305 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 WDR24Q96S15 920 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 SAP30LQ9HAJ7 183 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 VPS45Q9NRW7 570 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 RGL1Q9NZL6 768 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 FNIP2Q9P278 1114 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 PCDHB2Q9Y5E7 798 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 WDR17Q8IZU2 1322 aa3.89□□□□□ -1.79
VBP1-204ENST00000625964 VIPP01282 170 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 ALPLP05186 524 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 SRGAP2BP0DMP2 458 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 HSPA7P48741 367 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 RAE1P78406 368 aaKnown RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 SLC14A1Q13336 389 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 ATP1A4Q13733 1029 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 MAPKAPK3Q16644 382 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 ZNF628Q5EBL2 1059 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 TMEM196Q5HYL7 178 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 RANBP10Q6VN20 620 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 ZNF813Q6ZN06 617 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 FAM186BQ8IYM0 893 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 RBMXL3Q8N7X1 1067 aaKnown RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 C16orf52Q8NHV5 167 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 OSR1Q8TAX0 266 aaPredicted RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 PRR11Q96HE9 360 aaPredicted RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 HIC2Q96JB3 615 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 EIF3CQ99613 913 aaKnown RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 GDF15Q99988 308 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 FZD4Q9ULV1 537 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 VPS4AQ9UN37 437 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
VBP1-204ENST00000625964 FNDC1Q4ZHG4 1894 aaPredicted RBP3.88□□□□□ -1.79
VBP1-204ENST00000625964 DSCR3O14972 297 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 CBFA2T3O75081 653 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 ABCB4P21439 1286 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 WDR5P61964 334 aaKnown RBP3.87□□□□□ -1.79
VBP1-204ENST00000625964 NSUN2Q08J23 767 aaKnown RBP eCLIP3.87□□□□□ -1.79
VBP1-204ENST00000625964 DNASE1L3Q13609 305 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 MPEG1Q2M385 716 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 Q4G0T1 1027 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 TMTC4Q5T4D3 741 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 ATG9BQ674R7 924 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 DEPTORQ8TB45 409 aa3.87□□□□□ -1.79
VBP1-204ENST00000625964 PNISRQ8TF01 805 aaKnown RBP3.87□□□□□ -1.79
VBP1-204ENST00000625964 SGCZQ96LD1 299 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms