RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ADH1CP00326 375 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 SERPING1P05155 500 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 PLEKP08567 350 aaPredicted RBP20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 MAP3K7CLP57077 242 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 FMO1Q01740 532 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 PDE4CQ08493 712 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 BST2Q10589 180 aaKnown RBP20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 ZNF571Q7Z3V5 609 aaPredicted RBP20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 OLIG1Q8TAK6 271 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 AGPAT1Q99943 283 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 SEMA4GQ9NTN9 838 aa20.89■□□□□ 0.94
R3HCC1-210ENST00000625275 TULP2O00295 520 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 AXIN1O15169 862 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 APBB3O95704 486 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 CSRP2Q16527 193 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 TSR1Q2NL82 804 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 TDRD12Q587J7 1177 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 USP33Q8TEY7 942 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 ZNHIT6Q9NWK9 470 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 ARHGAP20Q9P2F6 1191 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 BZW2Q9Y6E2 419 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 PI4KAP42356 2102 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 K7EQS6 105 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 SETSIPP0DME0 302 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 ADH5P11766 374 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 EIF2DP41214 584 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 GPD2P43304 727 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 SLC8A3P57103 927 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 RHBDF2Q6PJF5 856 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 PRR23CQ6ZRP0 262 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 SLC35F5Q8WV83 523 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 OTUB2Q96DC9 234 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 LOXL4Q96JB6 756 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 NACA2Q9H009 215 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 PDCL3Q9H2J4 239 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 TLR8Q9NR97 1041 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 SH3BP1Q9Y3L3 701 aa20.88■□□□□ 0.93
R3HCC1-210ENST00000625275 TNRC6BQ9UPQ9 1833 aaKnown RBP20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 MED19A0JLT2 244 aaPredicted RBP20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 GOLGA6L6A8MZA4 724 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 HHLA1C9JL84 531 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 XPO1O14980 1071 aaKnown RBP20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 TLR5O60602 858 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 SEC13P55735 322 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 C2orf27AQ580R0 203 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 GPRIN1Q7Z2K8 1008 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 KBTBD6Q86V97 674 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 PIGZQ86VD9 579 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 WDTC1Q8N5D0 677 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 PANX2Q96RD6 677 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 PNKPQ96T60 521 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 PCDHB18PQ96TA0 734 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 EBF1Q9UH73 591 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 CYTH4Q9UIA0 394 aa20.87■□□□□ 0.93
R3HCC1-210ENST00000625275 GON4LQ3T8J9 2241 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 FOXD2O60548 495 aaPredicted RBP20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 EPN2O95208 641 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 CDH5P33151 784 aaPredicted RBP20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 PLA2G4AP47712 749 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 PGFP49763 221 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 ATXN1P54253 815 aaKnown RBP20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 LY6G5CQ5SRR4 150 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 PMF1Q6P1K2 205 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 C12orf40Q86WS4 652 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 C1orf131Q8NDD1 294 aaKnown RBP20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 TSTD1Q8NFU3 115 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 NETO1Q8TDF5 533 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 PDLIM2Q96JY6 352 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 CHP1Q99653 195 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 RTKNQ9BST9 563 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 PNPLA8Q9NP80 782 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 SEPT11Q9NVA2 429 aaKnown RBP20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 SCML2Q9UQR0 700 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 CEP83Q9Y592 693 aa20.86■□□□□ 0.93
R3HCC1-210ENST00000625275 LSM8O95777 96 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 CYP1A1P04798 512 aaPredicted RBP20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 APODP05090 189 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 IRF1P10914 325 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 SLC6A11P48066 632 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 GSDMDP57764 484 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 NOMO3P69849 1222 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 MRPS21P82921 87 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 CDK17Q00537 523 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 TRIM72Q6ZMU5 477 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 CCDC186Q7Z3E2 898 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 BBS7Q8IWZ6 715 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 TMEM35BQ8NCS4 154 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 ZC3H10Q96K80 434 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 UBXN6Q9BZV1 441 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 MMP17Q9ULZ9 603 aa20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 TPRP12270 2363 aaKnown RBP20.85■□□□□ 0.93
R3HCC1-210ENST00000625275 FAM170AA1A519 330 aa20.84■□□□□ 0.93
R3HCC1-210ENST00000625275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.84■□□□□ 0.93
R3HCC1-210ENST00000625275 DDX3XO00571 662 aaKnown RBP eCLIP20.84■□□□□ 0.934e-7■■■■■ 27.2
R3HCC1-210ENST00000625275 KAT7O95251 611 aa20.84■□□□□ 0.93
R3HCC1-210ENST00000625275 TNFAIP3P21580 790 aa20.84■□□□□ 0.93
R3HCC1-210ENST00000625275 FECHP22830 423 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms