RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 AKR1B10O60218 316 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 ZNF500O60304 480 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 LCA5LO95447 670 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 TBX18O95935 607 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 RETP07949 1114 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 FAM228BP0C875 321 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 RALAP11233 206 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 VDRP11473 427 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 ADH5P11766 374 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 RARGP13631 454 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 CHRNB2P17787 502 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 PGFP49763 221 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 MRPS21P82921 87 aaKnown RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 GFPT1Q06210 699 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 DMWDQ09019 674 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 GAB4Q2WGN9 574 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 RAB41Q5JT25 222 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 LY6G5CQ5SRR4 150 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 BTBD8Q5XKL5 378 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 NAIF1Q69YI7 327 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 PKN3Q6P5Z2 889 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 TMEM270Q6UE05 265 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 SLC47A2Q86VL8 602 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 RPLP0P6Q8NHW5 317 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 EZH1Q92800 747 aaPredicted RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 SPHK2Q9NRA0 654 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 OSER1Q9NX31 292 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 HESX1Q9UBX0 185 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 LSM7Q9UK45 103 aaKnown RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 BZW2Q9Y6E2 419 aaKnown RBP13.24□□□□□ -0.29
PNKP-217ENST00000625216 OBSL1O75147 1896 aa13.24□□□□□ -0.29
PNKP-217ENST00000625216 FANCMQ8IYD8 2048 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 ANAPC1Q9H1A4 1944 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 A0A1W2PQH9 124 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 K7EQS6 105 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 APODP05090 189 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 PAEPP09466 180 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 CCDC175P0C221 793 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 CCDC172P0C7W6 258 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 CYP11B1P15538 503 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 GRIA2P42262 883 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 TNFRSF4P43489 277 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 BCAT1P54687 386 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 COG7P83436 770 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 FMO1Q01740 532 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 PM20D1Q6GTS8 502 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 SCD5Q86SK9 330 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 PIGZQ86VD9 579 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 USP33Q8TEY7 942 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
PNKP-217ENST00000625216 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 NMUR1Q9HB89 426 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 RRAGDQ9NQL2 400 aaPredicted RBP13.23□□□□□ -0.29
PNKP-217ENST00000625216 TFR2Q9UP52 801 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 ZNF510Q9Y2H8 683 aa13.23□□□□□ -0.29
PNKP-217ENST00000625216 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
PNKP-217ENST00000625216 FRYLO94915 3013 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
PNKP-217ENST00000625216 GREM1O60565 184 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 LRP3O75074 770 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 KAT7O95251 611 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 APBB3O95704 486 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 MMEP08473 750 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 IRF1P10914 325 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 CD19P15391 556 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 SDHBP21912 280 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 ARHGAP25P42331 645 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 ID4P47928 161 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 SLC6A11P48066 632 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 BST2Q10589 180 aaKnown RBP13.22□□□□□ -0.29
PNKP-217ENST00000625216 DMC1Q14565 340 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 STILQ15468 1287 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 C10orf120Q5SQS8 335 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 CEP68Q76N32 757 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 TTC30AQ86WT1 665 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 DNAAF5Q86Y56 855 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 KCNV2Q8TDN2 545 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 GAB3Q8WWW8 586 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 PCDHB18PQ96TA0 734 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.22□□□□□ -0.29
PNKP-217ENST00000625216 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 ARHGEF4Q9NR80 690 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
PNKP-217ENST00000625216 DEC1Q9P2X7 70 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms