RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SLC37A4O43826 429 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PRKCBP05771 671 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MAPTP10636 758 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 MAPK1P28482 360 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RAB27AP51159 221 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MPP3Q13368 585 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SF3B3Q15393 1217 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 CYP51A1Q16850 503 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CNPY1Q3B7I2 92 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PDCD4Q53EL6 469 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 PQLC1Q8N2U9 271 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RTL3Q8N8U3 475 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 ASB2Q96Q27 587 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 GPRC5DQ9NZD1 345 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CARD8Q9Y2G2 431 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 EFCAB10A6NFE3 127 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 A8MUI8 341 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TMEM114B3SHH9 223 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 BMPR2Q13873 1038 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 GLRA4Q5JXX5 417 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 DENND5BQ6ZUT9 1274 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.14□□□□□ -0.95
VCL-206ENST00000623461 PTCD3Q96EY7 689 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SEMA6AQ9H2E6 1030 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ANAPC2Q9UJX6 822 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TBX20Q9UMR3 447 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 KBTBD13C9JR72 458 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 H0YC42 278 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CRKP46108 304 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RPL26P61254 145 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 RAD51Q06609 339 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MINDY2Q8NBR6 621 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CATSPERBQ9H7T0 1116 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ABCB1P08183 1280 aaPredicted RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 FRG1Q14331 258 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 ACAP1Q15027 740 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PERM1Q5SV97 790 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 GPR107Q5VW38 600 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 BNIPLQ7Z465 357 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ATG16L2Q8NAA4 619 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 POP5Q969H6 163 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 SKA1Q96BD8 255 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 VPS45Q9NRW7 570 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TNS3Q68CZ2 1445 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TM7SF2O76062 418 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PGAM1P18669 254 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TRAP1Q12931 704 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 PKN1Q16512 942 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 EPC2Q52LR7 807 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CYP4A22Q5TCH4 519 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 FAXCQ5TGI0 409 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PACS1Q6VY07 963 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 OTOAQ7RTW8 1153 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SLC47A2Q86VL8 602 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 EFHBQ8N7U6 833 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 KRT84Q9NSB2 600 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 KIAA1257Q9ULG3 409 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SPATA2Q9UM82 520 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MROH1Q8NDA8 1641 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MROH2AA6NES4 1674 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 A0A087X0B3 334 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ATG7O95352 703 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TGDSO95455 350 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 CRABP2P29373 138 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RAB25P57735 213 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 OTUD3Q5T2D3 398 aaPredicted RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 STK32CQ86UX6 486 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 AADATQ8N5Z0 425 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ACMSDQ8TDX5 336 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 SGF29Q96ES7 293 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 POLG2Q9UHN1 485 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ITGA11Q9UKX5 1188 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 NPHP4O75161 1426 aaPredicted RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 VCLP18206 1134 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 AKT1P31749 480 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 MSLNQ13421 630 aaPredicted RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 MIIPQ5JXC2 388 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 EGFLAMQ63HQ2 1017 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TTC7BQ86TV6 843 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 ZBTB8BQ8NAP8 495 aaPredicted RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 KBTBD8Q8NFY9 601 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 PIGBQ92521 554 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 OTULINQ96BN8 352 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 TLCD1Q96CP7 247 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
VCL-206ENST00000623461 REXO2Q9Y3B8 237 aaKnown RBP9.14□□□□□ -0.95
VCL-206ENST00000623461 SEC23AQ15436 765 aa9.13□□□□□ -0.95
VCL-206ENST00000623461 TAF5Q15542 800 aa9.13□□□□□ -0.95
VCL-206ENST00000623461 NUDT18Q6ZVK8 323 aa9.13□□□□□ -0.95
VCL-206ENST00000623461 MIER2Q8N344 545 aa9.13□□□□□ -0.95
VCL-206ENST00000623461 ACTL9Q8TC94 416 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms