RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 UPP2O95045 317 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 KLHL2O95198 593 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 RALBP11234 206 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 NR2C2P49116 596 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 ITGA9Q13797 1035 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 ANKRD20A2Q5SQ80 823 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 ANKRD20A1Q5TYW2 823 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 CXCL17Q6UXB2 119 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 UNC93AQ86WB7 457 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 CCNJLQ8IV13 435 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 TEX9Q8N6V9 391 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 ANKRD52Q8NB46 1076 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 FAM136AQ96C01 138 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PCDH18Q9HCL0 1135 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 TXNRD2Q9NNW7 524 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 SLC17A7Q9P2U7 560 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 CHADO15335 359 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 DNAJC8O75937 253 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 BDNFP23560 247 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PSMB4P28070 264 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PTPN4P29074 926 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PPM1FP49593 454 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 PDK4Q16654 411 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 C10orf120Q5SQS8 335 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 DNAJC9Q8WXX5 260 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 NKD2Q969F2 451 aaPredicted RBP13.65□□□□□ -0.22
SIRPA-204ENST00000622179 A0A1B0GUL6 1792 aa13.65□□□□□ -0.22
SIRPA-204ENST00000622179 SH3BP5O60239 455 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GLI3P10071 1580 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GRM5P41594 1212 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 ASPAP45381 313 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 MPP3Q13368 585 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 FSCN1Q16658 493 aaKnown RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 DDIASQ8IXT1 998 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 CDY2AQ9Y6F7 541 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 FBXO21O94952 628 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GBE1Q04446 702 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 SLC1A5Q15758 541 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 ANO4Q32M45 955 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 LCLAT1Q6UWP7 414 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 LPPQ93052 612 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 TWNKQ96RR1 684 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 FZD8Q9H461 694 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 POPDC2Q9HBU9 364 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 H0YGN5 161 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 FAM155BO75949 473 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GFAPP14136 432 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 CPA3P15088 417 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 SCNN1GP51170 649 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 EFHD1Q9BUP0 239 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 NFS1Q9Y697 457 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 FAM237BA0A1B0GVD1 139 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 AP3B1O00203 1094 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 PSMD3O43242 534 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GRIN3BO60391 1043 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 RNASEH2BQ5TBB1 312 aaKnown RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 CMTM5Q96DZ9 223 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 ZNF512Q96ME7 567 aaPredicted RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 SLC24A3Q9HC58 644 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 RUVBL2Q9Y230 463 aaKnown RBP13.64□□□□□ -0.23
SIRPA-204ENST00000622179 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
SIRPA-204ENST00000622179 GOLGA8CPA6NN73 597 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 E9PBE3 544 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 KLHL41O60662 606 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 CHEK2O96017 543 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 CAPRIN2Q6IMN6 1127 aaKnown RBP13.63□□□□□ -0.23
SIRPA-204ENST00000622179 RAET1EQ8TD07 263 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
SIRPA-204ENST00000622179 TKTL2Q9H0I9 626 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 CLGNO14967 610 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 TSPAN1O60635 241 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 ANXA9O76027 345 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 NPR3P17342 541 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 CALB2P22676 271 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 IL1R2P27930 398 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 NOS2P35228 1153 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 OGDHQ02218 1023 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 TFAP2DQ7Z6R9 452 aa13.63□□□□□ -0.23
SIRPA-204ENST00000622179 DCP1BQ8IZD4 617 aaKnown RBP13.63□□□□□ -0.23
SIRPA-204ENST00000622179 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms