RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 MMRN1Q13201 1228 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 IGDCC3Q8IVU1 814 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 TTC39CQ8N584 583 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 SNX27Q96L92 541 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 HEXIM2Q96MH2 286 aaKnown RBP18.09■□□□□ 0.49
FAM3A-222ENST00000621967 CYTH2Q99418 400 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 MIS12Q9H081 205 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 VPS11Q9H270 941 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 PLEKHA5Q9HAU0 1116 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.09■□□□□ 0.49
FAM3A-222ENST00000621967 TMEM161AQ9NX61 479 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 KIAA1257Q9ULG3 409 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.09■□□□□ 0.49
FAM3A-222ENST00000621967 GIT1Q9Y2X7 761 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 TEX264Q9Y6I9 313 aa18.09■□□□□ 0.49
FAM3A-222ENST00000621967 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 ZBBXA8MT70 800 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 HGSO14964 777 aaPredicted RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 CHADO15335 359 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 SPAG6O75602 509 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 TMEM132DQ14C87 1099 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 SH3PXD2AQ5TCZ1 1133 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 NPNTQ6UXI9 565 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 AGMOQ6ZNB7 445 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 FAM183BPQ6ZVS7 135 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 ZNF598Q86UK7 904 aaKnown RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 UBA3Q8TBC4 463 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 TCP10LQ8TDR4 215 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 RXFP2Q8WXD0 754 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 INPP5DQ92835 1189 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 UTP4Q969X6 686 aaKnown RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 RTP4Q96DX8 246 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 THOC1Q96FV9 657 aaKnown RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 RNF157Q96PX1 679 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 RAB3IPQ96QF0 476 aaPredicted RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.49
FAM3A-222ENST00000621967 CHMP2BQ9UQN3 213 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 C2CD2Q9Y426 696 aa18.08■□□□□ 0.49
FAM3A-222ENST00000621967 A8MUI8 341 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 C2CD2LO14523 706 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 DPYSL4O14531 572 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 WFS1O76024 890 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 AMHP03971 560 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 CCND1P24385 295 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 MLH1P40692 756 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 ELK3P41970 407 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 NDST1P52848 882 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 NRLP54845 237 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 TLDC1Q6P9B6 456 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 DARS2Q6PI48 645 aaKnown RBP18.08■□□□□ 0.48
FAM3A-222ENST00000621967 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.08■□□□□ 0.48
FAM3A-222ENST00000621967 C16orf59Q7L2K0 433 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 VSIG1Q86XK7 387 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 TAB3Q8N5C8 712 aaPredicted RBP18.08■□□□□ 0.48
FAM3A-222ENST00000621967 SLC44A1Q8WWI5 657 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 PIWIL1Q96J94 861 aaKnown RBP18.08■□□□□ 0.48
FAM3A-222ENST00000621967 TMEM237Q96Q45 408 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 USP29Q9HBJ7 922 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 PNPLA8Q9NP80 782 aa18.08■□□□□ 0.48
FAM3A-222ENST00000621967 TCRBV9S1A1TA0A576 114 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 E5RJQ4 531 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 DHRS4L1P0CG22 281 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 PDGFRAP16234 1089 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 WDR5P61964 334 aaKnown RBP18.07■□□□□ 0.48
FAM3A-222ENST00000621967 RAB6CQ53S08 254 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 SLC45A4Q5BKX6 768 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 GLB1LQ6UWU2 654 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 SH2D5Q6ZV89 423 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 NT5DC4Q86YG4 428 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 AGGF1Q8N302 714 aaeCLIP18.07■□□□□ 0.48
FAM3A-222ENST00000621967 STAMBPL1Q96FJ0 436 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 ZFP42Q96MM3 310 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 GAD1Q99259 594 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 RAB6CQ9H0N0 254 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 CNTN3Q9P232 1028 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 TSPAN16Q9UKR8 245 aa18.07■□□□□ 0.48
FAM3A-222ENST00000621967 ARL5CA6NH57 179 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 CAPN15O75808 1086 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 PIAS1O75925 651 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 FAM155BO75949 473 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 C1QAP02745 245 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 T-ENOLP0DO92 83 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 NEK3P51956 506 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 SLC18A2Q05940 514 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 PDK2Q15119 407 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 STILQ15468 1287 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 C15orf59Q2T9L4 293 aaPredicted RBP18.06■□□□□ 0.48
FAM3A-222ENST00000621967 GLRA4Q5JXX5 417 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 OR6B2Q6IFH4 312 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 ZC3H18Q86VM9 953 aaKnown RBP18.06■□□□□ 0.48
FAM3A-222ENST00000621967 CHSY1Q86X52 802 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 TEKT4Q8WW24 435 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 KIF12Q96FN5 646 aa18.06■□□□□ 0.48
FAM3A-222ENST00000621967 MYCBPQ99417 103 aaPredicted RBP18.06■□□□□ 0.48
FAM3A-222ENST00000621967 FRMD8Q9BZ67 464 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms