RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 DRC3Q9H069 523 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 ST6GALNAC4Q9H4F1 302 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 RAB21Q9UL25 225 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 ZNF189O75820 626 aaPredicted RBP12.64□□□□□ -0.39
GTF2I-218ENST00000620879 MMP8P22894 467 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 FLT3P36888 993 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 IFI35P80217 286 aaPredicted RBP12.64□□□□□ -0.39
GTF2I-218ENST00000620879 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 C6orf10Q5SRN2 563 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF2I-218ENST00000620879 C16orf59Q7L2K0 433 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 NCLNQ969V3 563 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 TSPAN17Q96FV3 270 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
GTF2I-218ENST00000620879 HIPK3Q9H422 1215 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 DMAC2Q9NW81 257 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 UTP6Q9NYH9 597 aaKnown RBP12.64□□□□□ -0.39
GTF2I-218ENST00000620879 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
GTF2I-218ENST00000620879 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 SETD1AO15047 1707 aaKnown RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 SUPT3HO75486 399 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ANP32DO95626 131 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MGAT1P26572 445 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ATXN3P54252 364 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 CUL3Q13618 768 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 SPDYAQ5MJ70 313 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PHF13Q86YI8 300 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 USP6NLQ92738 828 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 FRMD8P1Q9BZ68 369 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 TRMT13Q9NUP7 481 aaKnown RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 CASQ2O14958 399 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 SEPT4O43236 478 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 CA12O43570 354 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PYGLP06737 847 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 HMOX2P30519 316 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PTPN7P35236 360 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 TUFMP49411 452 aaKnown RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MBTD1Q05BQ5 628 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MPP3Q13368 585 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 TUSC3Q13454 348 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 TIGD7Q6NT04 549 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 TPGS1Q6ZTW0 290 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ADCK2Q7Z695 626 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 IFNEQ86WN2 208 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 KIF2BQ8N4N8 673 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 NTPCRQ9BSD7 190 aaKnown RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 NAT9Q9BTE0 207 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 FAM96AQ9H5X1 160 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MINDY3Q9H8M7 445 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 CD274Q9NZQ7 290 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 LTBP3Q9NS15 1303 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 RIPK2O43353 540 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 C22orf31O95567 290 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PYGBP11216 843 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PTK6Q13882 451 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MFN1Q8IWA4 741 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 MANSC1Q9H8J5 431 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 CASS4Q9NQ75 786 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 L3MBTL1Q9Y468 752 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 PCDHA2Q9Y5H9 948 aa12.63□□□□□ -0.39
GTF2I-218ENST00000620879 SF3B1O75533 1304 aaKnown RBP eCLIP12.63□□□□□ -0.39
GTF2I-218ENST00000620879 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
GTF2I-218ENST00000620879 CCDC22O60826 627 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SUPT7LO94864 414 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SERPINF2P08697 491 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 GOT1P17174 413 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 OR1D2P34982 312 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 CAPRIN1Q14444 709 aaKnown RBP12.62□□□□□ -0.39
GTF2I-218ENST00000620879 EFTUD2Q15029 972 aaKnown RBP eCLIP12.62□□□□□ -0.391e-7■■■■□ 24.9
GTF2I-218ENST00000620879 RAP1GAP2Q684P5 730 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 MRNIPQ6NTE8 343 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 RIBC1Q8N443 379 aaPredicted RBP12.62□□□□□ -0.39
GTF2I-218ENST00000620879 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 TMBIM4Q9HC24 238 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 CDH9Q9ULB4 789 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 USH1CQ9Y6N9 552 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 KDM3BQ7LBC6 1761 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 C2orf81A6NN90 581 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 A8MX80 341 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
GTF2I-218ENST00000620879 AOC2O75106 756 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SERPIND1P05546 499 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 KCNA3P22001 575 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SATB1Q01826 763 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SLC26A11Q86WA9 606 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 TMA16Q96EY4 203 aaKnown RBP12.62□□□□□ -0.39
GTF2I-218ENST00000620879 PPCSQ9HAB8 311 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 RRN3Q9NYV6 651 aa12.62□□□□□ -0.39
GTF2I-218ENST00000620879 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms