RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CIDEBQ9UHD4 219 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 STMND1H3BQB6 276 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CYP1A1P04798 512 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TSPAN8P19075 237 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 IP6K1Q92551 441 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TRIM63Q969Q1 353 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MAELQ96JY0 434 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TSEN34Q9BSV6 310 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FRMD8Q9BZ67 464 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 EXD2Q9NVH0 621 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 M0QYV0 167 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 AKAP3O75969 853 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 LGALS3BPQ08380 585 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 DOK7Q18PE1 504 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF423Q2M1K9 1284 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MYLK3Q32MK0 819 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RAP1GAP2Q684P5 730 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PADI6Q6TGC4 694 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 DNAJC14Q6Y2X3 702 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SYN2Q92777 582 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PHF24Q9UPV7 400 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 GRIN2AQ12879 1464 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TRPC4APQ8TEL6 797 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 APOPT1Q96IL0 206 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CYP26B1Q9NR63 512 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SCN3BQ9NY72 215 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 EPHA3P29320 983 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RALGPS2Q86X27 583 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 USP20Q9Y2K6 914 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RWDD3Q9Y3V2 267 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FLT4P35916 1363 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 STX7O15400 261 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SH3BGRLO75368 114 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RALBP11234 206 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ALAS1P13196 640 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PIGFQ07326 219 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FASTKD3Q14CZ7 662 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 UTP15Q8TED0 518 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 EIF2AK1Q9BQI3 630 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 APEX2Q9UBZ4 518 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CSADQ9Y600 493 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SORBS2O94875 1100 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CPA3P15088 417 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 POLR2BP30876 1174 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SLC30A10Q6XR72 485 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FAM149B1Q96BN6 582 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CNPY3Q9BT09 278 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MPP6Q9NZW5 540 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PTBP2Q9UKA9 531 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TMED5Q9Y3A6 229 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ERVK-7P63135 1459 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PDLIM1O00151 329 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ADORA2BP29275 332 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 HALP42357 657 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ERI1Q8IV48 349 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SYNPOQ8N3V7 929 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 HEATR9A2RTY3 570 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 FASP25445 335 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 WEE1P30291 646 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 GDI2P50395 445 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 RHAGQ02094 409 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 BST1Q10588 318 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ATG9AQ7Z3C6 839 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CPNE8Q86YQ8 564 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 BBS5Q8N3I7 341 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 DHRSXQ8N5I4 330 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 KIAA0895Q8NCT3 520 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SEPT1Q8WYJ6 367 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CCDC120Q96HB5 630 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 TPD52L3Q96J77 140 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 NACC1Q96RE7 527 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CHIAQ9BZP6 476 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 SH3GLB2Q9NR46 395 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 PTTG2Q9NZH5 202 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CCDC59Q9P031 241 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF624Q9P2J8 865 aaPredicted RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 CDH22Q9UJ99 828 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 MRPS7Q9Y2R9 242 aaKnown RBP5.17□□□□□ -1.58
VPS13D-214ENST00000620676 ADGRL1O94910 1474 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 NESP48681 1621 aa5.17□□□□□ -1.58
VPS13D-214ENST00000620676 VWA5AO00534 786 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 FOXO4P98177 505 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 CDK17Q00537 523 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 TIGD2Q4W5G0 525 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 ABRAXAS1Q6UWZ7 409 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 VN1R5Q7Z5H4 357 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 PROX1Q92786 737 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 SIAEQ9HAT2 523 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 XPNPEP3Q9NQH7 507 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 SIK3Q9Y2K2 1263 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 CHURC1-FNTBB4DL54 471 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 MYBPC1Q00872 1141 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 TMEM236Q5W0B7 351 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 GUF1Q8N442 669 aaKnown RBP5.16□□□□□ -1.58
VPS13D-214ENST00000620676 SCFD2Q8WU76 684 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 NRG4Q8WWG1 115 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 ART5Q96L15 291 aa5.16□□□□□ -1.58
VPS13D-214ENST00000620676 TPK1Q9H3S4 243 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms