RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SCML4Q8N228 414 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 PGBD3Q8N328 593 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 RNF139Q8WU17 664 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 TCEAL3Q969E4 200 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 CLSTN2Q9H4D0 955 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 ABCC13Q9NSE7 274 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
HMGN3-203ENST00000620514 BCLAF3A2AJT9 711 aaKnown RBP17.93■□□□□ 0.46
HMGN3-203ENST00000620514 GABRG2P18507 467 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 SLC9A1P19634 815 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 MFAP3P55082 362 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 MAP7D1Q3KQU3 841 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 KIAA1211LQ6NV74 962 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 DENND1BQ6P3S1 775 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 FAM217AQ8IXS0 508 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 CPXM2Q8N436 756 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 C12orf50Q8NA57 414 aaPredicted RBP17.93■□□□□ 0.46
HMGN3-203ENST00000620514 MIS12Q9H081 205 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 CD248Q9HCU0 757 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 ACP6Q9NPH0 428 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 VPS45Q9NRW7 570 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 CACNA2D2Q9NY47 1150 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 MBD1Q9UIS9 605 aaPredicted RBP17.93■□□□□ 0.46
HMGN3-203ENST00000620514 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
HMGN3-203ENST00000620514 RAD54BQ9Y620 910 aa17.93■□□□□ 0.46
HMGN3-203ENST00000620514 THADAQ6YHU6 1953 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 WASH3PC4AMC7 463 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 FOXD2O60548 495 aaPredicted RBP17.92■□□□□ 0.46
HMGN3-203ENST00000620514 TSPAN3O60637 253 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 CYBBP04839 570 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 GPD2P43304 727 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 DHPSP49366 369 aaPredicted RBP17.92■□□□□ 0.46
HMGN3-203ENST00000620514 TRIM65Q6PJ69 517 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 C11orf74Q86VG3 221 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 MLKLQ8NB16 471 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 IPO4Q8TEX9 1081 aaKnown RBP17.92■□□□□ 0.46
HMGN3-203ENST00000620514 DDI1Q8WTU0 396 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 IRGQQ8WZA9 623 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 HSFY1Q96LI6 401 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 GABRG3Q99928 467 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 CALCOCO1Q9P1Z2 691 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 SLC27A6Q9Y2P4 619 aa17.92■□□□□ 0.46
HMGN3-203ENST00000620514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 LETM1O95202 739 aaPredicted RBP17.91■□□□□ 0.46
HMGN3-203ENST00000620514 CAVIN2O95810 425 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 LTFP02788 710 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 HARS2P49590 506 aaKnown RBP17.91■□□□□ 0.46
HMGN3-203ENST00000620514 SDE2Q6IQ49 451 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 MSANTD2Q6P1R3 559 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 TMEFF1Q8IYR6 380 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 PIWIL1Q96J94 861 aaKnown RBP17.91■□□□□ 0.46
HMGN3-203ENST00000620514 SLC6A17Q9H1V8 727 aa17.91■□□□□ 0.46
HMGN3-203ENST00000620514 BECN2A8MW95 431 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 MAP3K13O43283 966 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 FBXO21O94952 628 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 FYNP06241 537 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 NDUFV2P19404 249 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
HMGN3-203ENST00000620514 RPL34P49207 117 aaKnown RBP17.9■□□□□ 0.46
HMGN3-203ENST00000620514 ARHGAP44Q17R89 818 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 DPCR1Q3MIW9 517 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 GBP6Q6ZN66 633 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 ARMCX6Q7L4S7 300 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 CYP2U1Q7Z449 544 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 SPACA7Q96KW9 195 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 ST7Q9NRC1 585 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 CYTH4Q9UIA0 394 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 STOML2Q9UJZ1 356 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 AJAP1Q9UKB5 411 aaPredicted RBP17.9■□□□□ 0.46
HMGN3-203ENST00000620514 STON1Q9Y6Q2 735 aa17.9■□□□□ 0.46
HMGN3-203ENST00000620514 SPTBN2O15020 2390 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 GOLGA6L7A0A1B0GV03 622 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 PATE3B3GLJ2 98 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 GFRA2O00451 464 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 THAP12O43422 761 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 IGLV3-27P01718 113 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 HOXD9P28356 352 aaPredicted RBP17.89■□□□□ 0.45
HMGN3-203ENST00000620514 GNA15P30679 374 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 USP8P40818 1118 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 PTGER3P43115 390 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 SGSHP51688 502 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 MPPE1Q53F39 396 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 TMEM215Q68D42 235 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 LPCAT2Q7L5N7 544 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 ENOSF1Q7L5Y1 443 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 ANKS1BQ7Z6G8 1248 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 SORCS1Q8WY21 1168 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 PIGKQ92643 395 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 CD93Q9NPY3 652 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 THAP10Q9P2Z0 257 aaPredicted RBP17.89■□□□□ 0.45
HMGN3-203ENST00000620514 NAALADL1Q9UQQ1 740 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 NUP205Q92621 2012 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 NCOR2Q9Y618 2525 aa17.89■□□□□ 0.45
HMGN3-203ENST00000620514 NCAM1P13591 858 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 PON1P27169 355 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 IL12RB1P42701 662 aa17.88■□□□□ 0.45
HMGN3-203ENST00000620514 LIMK1P53667 647 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms