RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CDC16Q13042 620 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 MBLAC2Q68D91 279 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 LCLAT1Q6UWP7 414 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 CDKL3Q8IVW4 592 aaPredicted RBP21.07■□□□□ 0.96
NEK3-208ENST00000618534 GPR20Q99678 358 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 EMCNQ9ULC0 261 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 BARX2Q9UMQ3 279 aaPredicted RBP21.07■□□□□ 0.96
NEK3-208ENST00000618534 ZCCHC18P0CG32 403 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 CYP2F1P24903 491 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 PDE1BQ01064 536 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 OLFML1Q6UWY5 402 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 MFN1Q8IWA4 741 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 NRDE2Q9H7Z3 1164 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 DNAJB4Q9UDY4 337 aa21.07■□□□□ 0.96
NEK3-208ENST00000618534 DPYSL4O14531 572 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 TPSB2P20231 275 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 CRABP2P29373 138 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 ATICP31939 592 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 GMPSP49915 693 aaPredicted RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 SLC10A2Q12908 348 aaPredicted RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 TPSAB1Q15661 275 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 GOLGA7BQ2TAP0 167 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 TEDDM1Q5T9Z0 273 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 TMCO4Q5TGY1 634 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 TIFABQ6ZNK6 161 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 RAPH1Q70E73 1250 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 WDR75Q8IWA0 830 aaKnown RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 POU5F2Q8N7G0 328 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 FGD4Q96M96 766 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 ZNF670Q9BS34 389 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 VRTNQ9H8Y1 702 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 PDP2Q9P2J9 529 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 F5H423 210 aaPredicted RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 FGF3P11487 239 aaPredicted RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 P4HA1P13674 534 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 TFE3P19532 575 aaPredicted RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 SDC4P31431 198 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 SARNPP82979 210 aaKnown RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 HIC1Q14526 733 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 RABGAP1LQ5R372 815 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 PIWIL2Q8TC59 973 aaKnown RBP21.06■□□□□ 0.96
NEK3-208ENST00000618534 USP6NLQ92738 828 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 MOCS1Q9NZB8 636 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 NR2E3Q9Y5X4 410 aa21.06■□□□□ 0.96
NEK3-208ENST00000618534 BUD23O43709 281 aaKnown RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 GCATO75600 419 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 SNUPNO95149 360 aaKnown RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 KCNA4P22459 653 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 POLE2P56282 527 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 INHBEP58166 350 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 INCA1Q0VD86 236 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 N4BP2L1Q5TBK1 243 aaPredicted RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 PMF1Q6P1K2 205 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 TUBGCP5Q96RT8 1024 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 TBCBQ99426 244 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 MAGEB5Q9BZ81 275 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 BTBD7Q9P203 1132 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 ARHGAP42A6NI28 874 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 NOP56O00567 594 aaKnown RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 ALDOAP04075 364 aaKnown RBP21.05■□□□□ 0.96
NEK3-208ENST00000618534 TGFB3P10600 412 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 HDAC4P56524 1084 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 AP1ARQ63HQ0 302 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 EFCAB12Q6NXP0 572 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 KHSRPQ92945 711 aaKnown RBP eCLIP21.05■□□□□ 0.966e-7■■□□□ 14.4
NEK3-208ENST00000618534 GBP5Q96PP8 586 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 PPP1R16BQ96T49 567 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 MIS12Q9H081 205 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 STK32BQ9NY57 414 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 SORCS3Q9UPU3 1222 aa21.05■□□□□ 0.96
NEK3-208ENST00000618534 WDR27A2RRH5 827 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 MDM4O15151 490 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 FKBP6O75344 327 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 LGR5O75473 907 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 SLC1A6P48664 564 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 CRADDP78560 199 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 PRKG1Q13976 671 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 RALGPS1Q5JS13 557 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 EFHC1Q5JVL4 640 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 SCUBE3Q8IX30 993 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 PYDC1Q8WXC3 89 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 S100A14Q9HCY8 104 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 TPP1O14773 563 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 L1CAMP32004 1257 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 DPY19L2Q6NUT2 758 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 C4orf22Q6V702 233 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 ATG14Q6ZNE5 492 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 DENND5BQ6ZUT9 1274 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 MAVSQ7Z434 540 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 NT5C1AQ9BXI3 368 aa21.04■□□□□ 0.96
NEK3-208ENST00000618534 RPS12P25398 132 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 CNTFP26441 200 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 ATXN1P54253 815 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 PDE1CQ14123 709 aaPredicted RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 RBBP5Q15291 538 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 SMAD1Q15797 465 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 SLC10A6Q3KNW5 377 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 TREML2Q5T2D2 321 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 PPP1R26Q5T8A7 1209 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms