RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LVRNQ6Q4G3 990 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAM72BQ86X60 149 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 TMEM209Q96SK2 561 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SMOQ99835 787 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 C11orf84Q9BUA3 381 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 PITPNM3Q9BZ71 974 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ACSS3Q9H6R3 686 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 KCNK1O00180 336 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 UGT1A9O60656 530 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ITGB1P05556 798 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 VAV1P15498 845 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 BDNFP23560 247 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ADRA1DP25100 572 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 LRPAP1P30533 357 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 PTK7Q13308 1070 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 HHATQ5VTY9 493 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 PPP1R21Q6ZMI0 780 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAM35AQ86V20 835 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 CENPIQ92674 756 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 ADAM2Q99965 735 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 UGT1A7Q9HAW7 530 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 UGT1A10Q9HAW8 530 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 UGT1A8Q9HAW9 530 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 ANLNQ9NQW6 1124 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 Q9Y3F1 56 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SHROOM3Q8TF72 1996 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 CXorf49A8MYA2 514 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 INHBAP08476 426 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 TAC1P20366 129 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FCGRTP55899 365 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 GJA9P57773 515 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 CAND1Q86VP6 1230 aaKnown RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 UNC5BQ8IZJ1 945 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 RNF139Q8WU17 664 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 CCT6BQ92526 530 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
CIITA-212ENST00000618207 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 IL1RAPL1Q9NZN1 696 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 NUDT5Q9UKK9 219 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
CIITA-212ENST00000618207 SCN10AQ9Y5Y9 1956 aa12.83□□□□□ -0.35
CIITA-212ENST00000618207 E7ESA3 106 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 BMPR2Q13873 1038 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SPARCL1Q14515 664 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 CCDC134Q9H6E4 229 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 DDIT4Q9NX09 232 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
CIITA-212ENST00000618207 ZMYND8Q9ULU4 1186 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 FZD10Q9ULW2 581 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SUFUQ9UMX1 484 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 CCDC189A1A4V9 331 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 BCLAF3A2AJT9 711 aaKnown RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 GABRDO14764 452 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 ASMTLO95671 621 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 MYCP01106 439 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 FYNP06241 537 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 NEFHP12036 1026 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 HOXC8P31273 242 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 NOS2P35228 1153 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SESN2P58004 480 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 TRMT10BQ6PF06 316 aaKnown RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 SERINC5Q86VE9 423 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 CDKL3Q8IVW4 592 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 HACE1Q8IYU2 909 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 CCDC63Q8NA47 563 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 TCP10LQ8TDR4 215 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 DCAKDQ8WVC6 231 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 CYTH2Q99418 400 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SLC38A7Q9NVC3 462 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SLC17A6Q9P2U8 582 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 SLC24A2Q9UI40 661 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
CIITA-212ENST00000618207 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
CIITA-212ENST00000618207 ZNF236Q9UL36 1845 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 I6L893 689 aaPredicted RBP12.82□□□□□ -0.36
CIITA-212ENST00000618207 CHADO15335 359 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 CPP00450 1065 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 SCTRP47872 440 aa12.82□□□□□ -0.36
CIITA-212ENST00000618207 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms