RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CDK5RAP1Q96SZ6 601 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 EPC1Q9H2F5 836 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 OLA1Q9NTK5 396 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 TMLHEQ9NVH6 421 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 KLHL11Q9NVR0 708 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 MTRRQ9UBK8 725 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 MTRF1LQ9UGC7 380 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 AP4E1Q9UPM8 1137 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-210ENST00000617904 APOL1O14791 398 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 TTI1O43156 1089 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 GABBR2O75899 941 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 TGM2P21980 687 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 ACTN2P35609 894 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 NDUFV1P49821 464 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 HDAC4P56524 1084 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 CAV1Q03135 178 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 NME3Q13232 169 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 SMAD4Q13485 552 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 BYSLQ13895 437 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 TAF12Q16514 161 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 ATP13A4Q4VNC1 1196 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 BSPRYQ5W0U4 402 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 DDX53Q86TM3 631 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC39A11Q8N1S5 342 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 COLGALT1Q8NBJ5 622 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 P3H4Q92791 437 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 NT5C3BQ969T7 300 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 NTAN1Q96AB6 310 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 LRRC45Q96CN5 670 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 MSLNLQ96KJ4 702 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 DHX35Q9H5Z1 703 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 DDIT4Q9NX09 232 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.43■□□□□ 0.381e-17■■■■■ 62.9
TRAPPC3-210ENST00000617904 CD207Q9UJ71 328 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 SCML2Q9UQR0 700 aa17.43■□□□□ 0.38
TRAPPC3-210ENST00000617904 FNDC1Q4ZHG4 1894 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 YJEFN3A6XGL0 299 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 E7ENQ6 273 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 APOC4-APOC2K7ER74 178 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 DAPK3O43293 454 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 CST8O60676 142 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 APOC2P02655 101 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 OR4Q2P0C623 313 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 HAPLN1P10915 354 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC2A3P11169 496 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 YWHAQP27348 245 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 IL1R2P27930 398 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 ELF1P32519 619 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 IFRD2Q12894 506 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 SNX1Q13596 522 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 VEPH1Q14D04 833 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 DPYSL2Q16555 572 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 TAZQ16635 292 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 RTP2Q5QGT7 225 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 ACBD5Q5T8D3 534 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC8B1Q6J4K2 584 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 DENND5BQ6ZUT9 1274 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 ARFGAP1Q8N6T3 406 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 PDZD8Q8NEN9 1154 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 C1orf54Q8WWF1 131 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 SEPT5Q99719 369 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 TLR8Q9NR97 1041 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 MRPL17Q9NRX2 175 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 CLEC1BQ9P126 229 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 ASIC3Q9UHC3 531 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 SLC12A6Q9UHW9 1150 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 CDY1Q9Y6F8 540 aa17.42■□□□□ 0.38
TRAPPC3-210ENST00000617904 PLXNA4Q9HCM2 1894 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 MTMR11A4FU01 709 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 KRT10P13645 584 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 TCF4P15884 667 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 DSG1Q02413 1049 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 PPP6R3Q5H9R7 873 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 BRMS1LQ5PSV4 323 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 TRNP1Q6NT89 227 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 EFHBQ8N7U6 833 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 RSAD2Q8WXG1 361 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 PPP2R3CQ969Q6 453 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 SERPINB11Q96P15 392 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 PGLYRP2Q96PD5 576 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 RHOBTB2Q9BYZ6 727 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 WDCPQ9H6R7 721 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 PCDH18Q9HCL0 1135 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 AFF4Q9UHB7 1163 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 NAALADL1Q9UQQ1 740 aa17.41■□□□□ 0.38
TRAPPC3-210ENST00000617904 LIASO43766 372 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 TBC1D4O60343 1298 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 ITGAVP06756 1048 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 ATF2P15336 505 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 ITIH2P19823 946 aa17.4■□□□□ 0.38
TRAPPC3-210ENST00000617904 HTR7P34969 479 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms