RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 TRIM67Q6ZTA4 783 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
RECQL4-209ENST00000617875 DEFB106AQ8N104 65 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 PABPC5Q96DU9 382 aaKnown RBP16.49■□□□□ 0.23
RECQL4-209ENST00000617875 CCDC97Q96F63 343 aaPredicted RBP16.49■□□□□ 0.23
RECQL4-209ENST00000617875 VCPIP1Q96JH7 1222 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 OMDQ99983 421 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 HAPLN2Q9GZV7 340 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 RABGEF1Q9UJ41 708 aa16.49■□□□□ 0.23
RECQL4-209ENST00000617875 ZNF214Q9UL59 606 aaPredicted RBP16.49■□□□□ 0.23
RECQL4-209ENST00000617875 M0QZ92 97 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ACKR2O00590 384 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 PAPSS1O43252 624 aaPredicted RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 BUD23O43709 281 aaKnown RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 RGS20O76081 388 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 VDRP11473 427 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ETFBP38117 255 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ABL2P42684 1182 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 COPAP53621 1224 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ACAP1Q15027 740 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 MPP5Q8N3R9 675 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 TFB1MQ8WVM0 346 aaKnown RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 APOPT1Q96IL0 206 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 EBF4Q9BQW3 602 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ACSS3Q9H6R3 686 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 GRID1Q9ULK0 1009 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 SPATA31C2B4DYI2 1134 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 TRUB2O95900 331 aaKnown RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 CYP2C9P11712 490 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 CYP1B1Q16678 543 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 APPL2Q8NEU8 664 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 OR52K1Q8NGK4 314 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 BHMTQ93088 406 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 PIF1Q9H611 641 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 H3BRB1 525 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 CASQ2O14958 399 aaPredicted RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 PSMB4P28070 264 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ABCD1P33897 745 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 SUDS3Q9H7L9 328 aaPredicted RBP16.48■□□□□ 0.23
RECQL4-209ENST00000617875 ETNK2Q9NVF9 386 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 AURKCQ9UQB9 309 aa16.48■□□□□ 0.23
RECQL4-209ENST00000617875 TPP1O14773 563 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 KIF3CO14782 793 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 RGL2O15211 777 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 NSUN2Q08J23 767 aaKnown RBP eCLIP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 PMF1Q6P1K2 205 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 STKLD1Q8NE28 680 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 MRPL45Q9BRJ2 306 aaKnown RBP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 KNL1Q8NG31 2342 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 C2CD2LO14523 706 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 CYP2B6P20813 491 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 IVDP26440 423 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 CCDC142Q17RM4 750 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 DNAL1Q4LDG9 190 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 RNF217Q8TC41 542 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 RNF157Q96PX1 679 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 TMEM109Q9BVC6 243 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 FARP2O94887 1054 aaPredicted RBP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 LSM8O95777 96 aaKnown RBP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 RALBP11234 206 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
RECQL4-209ENST00000617875 IRGCQ6NXR0 463 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 SH3TC2Q8TF17 1288 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 MFHAS1Q9Y4C4 1052 aa16.47■□□□□ 0.23
RECQL4-209ENST00000617875 RNF103O00237 685 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 GRIN3BO60391 1043 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 ARIH2O95376 493 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 ARF4P18085 180 aaPredicted RBP16.46■□□□□ 0.23
RECQL4-209ENST00000617875 TAF12Q16514 161 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 TMPRSS6Q8IU80 811 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 GCOM2Q9BZD3 368 aaPredicted RBP16.46■□□□□ 0.23
RECQL4-209ENST00000617875 BARX2Q9UMQ3 279 aaPredicted RBP16.46■□□□□ 0.23
RECQL4-209ENST00000617875 GIPC1O14908 333 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 LYPLA2O95372 231 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 TXLNGYQ9BZA5 131 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 CAAP1Q9H8G2 361 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 TAGLN3Q9UI15 199 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 STAP1Q9ULZ2 295 aa16.46■□□□□ 0.23
RECQL4-209ENST00000617875 SCAMP3O14828 347 aaKnown RBP16.46■□□□□ 0.23
RECQL4-209ENST00000617875 PPEF2O14830 753 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms