RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 TRIM43Q96BQ3 446 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 VN1R3Q9BXE9 311 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 FRMD8P1Q9BZ68 369 aaPredicted RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 CRISPLD1Q9H336 500 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 DNAJC17Q9NVM6 304 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ANAPC5Q9UJX4 755 aa21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 SF3B1O75533 1304 aaKnown RBP eCLIP21.4■■□□□ 1.02
CNTNAP3B-212ENST00000617422 ZNF487B1APH4 448 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TBC1D4O60343 1298 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SOAT2O75908 522 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DGKIO75912 1065 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 AMPD1P23109 780 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ATP1A2P50993 1020 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PMS2P54278 862 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 GBE1Q04446 702 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 IKBKEQ14164 716 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 HIBCHQ6NVY1 386 aaPredicted RBP21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DCP1BQ8IZD4 617 aaKnown RBP21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 LRRC43Q8N309 656 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 CCDC33Q8N5R6 958 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TMEM175Q9BSA9 504 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 C11orf49Q9H6J7 331 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 CWH43Q9H720 699 aa21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 MTRF1LQ9UGC7 380 aaKnown RBP21.39■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM72CH0Y354 149 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM72AQ5TYM5 149 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ICE2Q659A1 982 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM72DQ6L9T8 149 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM43BQ6ZT52 329 aaPredicted RBP21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SCD5Q86SK9 330 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TAC4Q86UU9 113 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 CCDC25Q86WR0 208 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM72BQ86X60 149 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PGAP3Q96FM1 320 aaPredicted RBP21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PCDH9Q9HC56 1237 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DDIT4Q9NX09 232 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 MCF2LO15068 1137 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 EFEMP2O95967 443 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ADRA1BP35368 520 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 LBX1P52954 281 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ARPP19P56211 112 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PRSS55Q6UWB4 352 aaPredicted RBP21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 NETO2Q8NC67 525 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 GPR152Q8TDT2 470 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM129AQ9BZQ8 928 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 NMUR1Q9HB89 426 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TMBIM4Q9HC24 238 aa21.38■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DNALI1O14645 258 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 CSF2RAP15509 400 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TGM2P21980 687 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RPL22P35268 128 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 USP46P62068 366 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DEFB103AP81534 67 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ZNF844Q08AG5 666 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ZNF280DQ6N043 979 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 TAB3Q8N5C8 712 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DQX1Q8TE96 717 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FUBP3Q96I24 572 aaKnown RBP eCLIP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PABPC3Q9H361 631 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 USP29Q9HBJ7 922 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 OSER1Q9NX31 292 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 KIAA0754O94854 1291 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SHBGP04278 402 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 MDH1P40925 334 aaKnown RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 C1QTNF8P60827 252 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 MTMR3Q13615 1198 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 NFE2Q16621 373 aaPredicted RBP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 CEP85LQ5SZL2 805 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 NCBP2-AS2Q69YL0 99 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ARHGEF4Q9NR80 690 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 GGA2Q9UJY4 613 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FBXW11Q9UKB1 542 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SLC27A5Q9Y2P5 690 aa21.37■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ADAM12O43184 909 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 YWHAGP61981 247 aaKnown RBP eCLIP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RNF19BQ6ZMZ0 732 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PSTKQ8IV42 348 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SUGP1Q8IWZ8 645 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ANKLE1Q8NAG6 615 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RNF139Q8WU17 664 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RSAD2Q8WXG1 361 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RABEP2Q9H5N1 569 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 NUDT5Q9UKK9 219 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PCDHB5Q9Y5E4 795 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SNX10Q9Y5X0 201 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 OR6C75A6NL08 312 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 IGLV3-25P01717 112 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 MYZAPP0CAP1 466 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RARGP13631 454 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 LIG3P49916 1009 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 ROR1Q01973 937 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 GAD2Q05329 585 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 EIF4EBP2Q13542 120 aaPredicted RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 RNASEH2BQ5TBB1 312 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 FAM117BQ6P1L5 589 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 DARS2Q6PI48 645 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 YTHDF3Q7Z739 585 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 SLC9A7Q96T83 725 aa21.36■■□□□ 1.01
CNTNAP3B-212ENST00000617422 PRDM5Q9NQX1 630 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms