RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 CHST8Q9H2A9 424 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 DRG1Q9Y295 367 aaKnown RBP4.11□□□□□ -1.75
CBWD1-224ENST00000616803 ABCC4O15439 1325 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 LTN1O94822 1766 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 FLT4P35916 1363 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 RGS12O14924 1447 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 NFAT5O94916 1531 aa4.11□□□□□ -1.75
CBWD1-224ENST00000616803 FAM208AQ9UK61 1670 aaKnown RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 CHL1O00533 1208 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 PPM1GO15355 546 aaPredicted RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 TSPAN6O43657 245 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 SRGAP2O75044 1071 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 TUBB4AP04350 444 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 APEHP13798 732 aaKnown RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 GKP32189 559 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 DIO1P49895 249 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 BCAT1P54687 386 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 TPTEP56180 551 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 LMAN2Q12907 356 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 PPP2R5AQ15172 486 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 CNGA2Q16280 664 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 Q4G0T1 1027 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 CXorf57Q6NSI4 855 aaKnown RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 FTSJ3Q8IY81 847 aaKnown RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 TSPYL6Q8N831 410 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 ABHD11Q8NFV4 315 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 JDP2Q8WYK2 163 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 ZBTB9Q96C00 473 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 KAZALD1Q96I82 304 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 SNX18Q96RF0 628 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 THUMPD2Q9BTF0 503 aaKnown RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 DPCDQ9BVM2 203 aaPredicted RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 STK31Q9BXU1 1019 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 ZNF518BQ9C0D4 1074 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 MAP3K19Q56UN5 1328 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 IGSF1Q8N6C5 1336 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 MED1Q15648 1581 aaPredicted RBP4.1□□□□□ -1.75
CBWD1-224ENST00000616803 LMO7Q8WWI1 1683 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 CAMTA1Q9Y6Y1 1673 aa4.1□□□□□ -1.75
CBWD1-224ENST00000616803 TRPM3Q9HCF6 1732 aaPredicted RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 VSTM5A8MXK1 200 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 ADAM10O14672 748 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 TPP1O14773 563 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 RRP9O43818 475 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 MYF5P13349 255 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 BRAFP15056 766 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 ZKSCAN1P17029 563 aaPredicted RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 BTF3P20290 206 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 TIRAPP58753 221 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 HTRA4P83105 476 aaPredicted RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 ZNF750Q32MQ0 723 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 RNF220Q5VTB9 566 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 NXNQ6DKJ4 435 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 CHST15Q7LFX5 561 aaPredicted RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 ITPRIPQ8IWB1 547 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 GALNT16Q8N428 558 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 C9orf106Q8NAJ2 232 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 SPSB4Q96A44 273 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 TIFAQ96CG3 184 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 NMD3Q96D46 503 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 DAZAP1Q96EP5 407 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 EFHD1Q9BUP0 239 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 APOL5Q9BWW9 433 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 API5Q9BZZ5 524 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 CHMP4BQ9H444 224 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 MLXIPLQ9NP71 852 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 A1CFQ9NQ94 594 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 MID2Q9UJV3 735 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 SCAF8Q9UPN6 1271 aaKnown RBP4.09□□□□□ -1.75
CBWD1-224ENST00000616803 PCDHGB6Q9Y5F9 930 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 WDR17Q8IZU2 1322 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 RTL1A6NKG5 1358 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 NCAPD2Q15021 1401 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 ADGRL3Q9HAR2 1447 aa4.09□□□□□ -1.75
CBWD1-224ENST00000616803 H7C1Q1 480 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 CES2O00748 559 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 CD3EAPO15446 510 aaKnown RBP4.08□□□□□ -1.76
CBWD1-224ENST00000616803 HTATSF1O43719 755 aaKnown RBP4.08□□□□□ -1.76
CBWD1-224ENST00000616803 SLIT3O75094 1523 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 MOSPD3O75425 235 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 RASAL1O95294 804 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 RGPD2P0DJD1 1756 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
CBWD1-224ENST00000616803 TIAL1Q01085 375 aaKnown RBP eCLIP4.08□□□□□ -1.76
CBWD1-224ENST00000616803 NUCB1Q02818 461 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 MST1RQ04912 1400 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 KIF1AQ12756 1690 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 RAB32Q13637 225 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 CCNIQ14094 377 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 TWISTNBQ3B726 338 aaPredicted RBP4.08□□□□□ -1.76
CBWD1-224ENST00000616803 TBC1D25Q3MII6 688 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 MINDY4Q4G0A6 757 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 HSP90AB2PQ58FF8 381 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 CACHD1Q5VU97 1274 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 SULT6B1Q6IMI4 303 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 KDM3BQ7LBC6 1761 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 TTC8Q8TAM2 541 aa4.08□□□□□ -1.76
CBWD1-224ENST00000616803 LMTK3Q96Q04 1460 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms