RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 MBD4O95243 580 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CER1O95813 267 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 TFRCP02786 760 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 TMEM225BP0DP42 221 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 DRD1P21728 446 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CXCR5P32302 372 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 PBX1P40424 430 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CASP2P42575 452 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 LIFRP42702 1097 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 GSTM5P46439 218 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 AVPR1BP47901 424 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CLCN2P51788 898 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 NXPH1P58417 271 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 VAMP2P63027 116 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 MPP1Q00013 466 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 MTAPQ13126 283 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 SMAD1Q15797 465 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 GALNTL6Q49A17 601 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 MAP3K21Q5TCX8 1036 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 DGAT2L7PQ6IED9 249 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 PIK3AP1Q6ZUJ8 805 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 MAVSQ7Z434 540 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 ANKS1BQ7Z6G8 1248 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CAND1Q86VP6 1230 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 HEATR4Q86WZ0 1026 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 RAB11FIP4Q86YS3 637 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 MYCBPAPQ8TBZ2 947 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 FKBP10Q96AY3 582 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 RSPRY1Q96DX4 576 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 TWNKQ96RR1 684 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 EIF3CQ99613 913 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 PAAF1Q9BRP4 392 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 TBCCD1Q9NVR7 557 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 PI4KBQ9UBF8 816 aa4.88□□□□□ -1.63
NEAT1-205ENST00000616315 NKX1-2Q9UD57 310 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 RRP7AQ9Y3A4 280 aaKnown RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 COL11A2P13942 1736 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 COL3A1P02461 1466 aaPredicted RBP4.88□□□□□ -1.63
NEAT1-205ENST00000616315 CCDC196A0A1B0GTZ2 297 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 PIPSLA2A3N6 862 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 A6NLC8 198 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 A8MVJ9 347 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 PROM1O43490 865 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 RHOP08100 348 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 HKR1P10072 659 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 ELF1P32519 619 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 KRT9P35527 623 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 LIPAP38571 399 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 HNRNPMP52272 730 aaKnown RBP eCLIP4.87□□□□□ -1.633e-66■■□□□ 12.5
NEAT1-205ENST00000616315 DGKQP52824 942 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 GUCY1B3Q02153 619 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 SF3B3Q15393 1217 aaKnown RBP4.87□□□□□ -1.63
NEAT1-205ENST00000616315 DLGAP5Q15398 846 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 ZNF618Q5T7W0 954 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 SYT13Q7L8C5 426 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 KRT27Q7Z3Y8 459 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 LRRC71Q8N4P6 559 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 TOR1AIP2Q8NFQ8 470 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 OVCA2Q8WZ82 227 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 HTRA1Q92743 480 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 PTCD3Q96EY7 689 aaKnown RBP4.87□□□□□ -1.63
NEAT1-205ENST00000616315 CHODLQ9H9P2 273 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 NOD2Q9HC29 1040 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 LIN7CQ9NUP9 197 aaKnown RBP4.87□□□□□ -1.63
NEAT1-205ENST00000616315 TMLHEQ9NVH6 421 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 TMEM160Q9NX00 188 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 KCND3Q9UK17 655 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 FBXO9Q9UK97 447 aaPredicted RBP4.87□□□□□ -1.63
NEAT1-205ENST00000616315 DERAQ9Y315 318 aa4.87□□□□□ -1.63
NEAT1-205ENST00000616315 SLC38A8A6NNN8 435 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CTIFO43310 598 aaKnown RBP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 FESP07332 822 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CNPP09543 421 aaKnown RBP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 MAN1A1P33908 653 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CCR5P51681 352 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 RBM5P52756 815 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CHRNDQ07001 517 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 FOXF2Q12947 444 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 MAPK7Q13164 816 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 BFSP2Q13515 415 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 TP53BP2Q13625 1128 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 ANKRD1Q15327 319 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 TBCCQ15814 346 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 TBRG1Q3YBR2 411 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 AASDHQ4L235 1098 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 HYIQ5T013 277 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 TREML2Q5T2D2 321 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 FAAH2Q6GMR7 532 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 CCDC144NLQ6NUI1 221 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 BBS12Q6ZW61 710 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 LNX2Q8N448 690 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEAT1-205ENST00000616315 PCYOX1LQ8NBM8 494 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 SLC22A17Q8WUG5 538 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 ASB10Q8WXI3 467 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 MCRS1Q96EZ8 462 aa4.86□□□□□ -1.63
NEAT1-205ENST00000616315 WDYHV1Q96HA8 205 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms