RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 EIF2AK1Q9BQI3 630 aaKnown RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 NUMA1Q14980 2115 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ZBTB39O15060 712 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 DGAT1O75907 488 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 CHRNB3Q05901 458 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 CBX3Q13185 183 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 KNOP1Q1ED39 458 aaKnown RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 LRRC36Q1X8D7 754 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ZNF557Q8N988 423 aaPredicted RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 SGF29Q96ES7 293 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 FAM25EA8MYX2 175 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 ATP9AO75110 1047 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 GARTP22102 1010 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 RFC5P40937 340 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 CDH13P55290 713 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 CLCA4Q14CN2 919 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 POM121L1PQ3SYA9 428 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 GPR158Q5T848 1215 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
TCF4-248ENST00000616053 QRFPRQ96P65 431 aa12.96□□□□□ -0.33
TCF4-248ENST00000616053 GALNT3Q14435 633 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 OR2L5Q8NG80 312 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 CHID1Q9BWS9 393 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3DA0A087WVF3 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3IA0A087WXS9 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3EA0A087X179 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3KA0A087X1G2 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3FA6NER0 549 aaPredicted RBP12.96□□□□□ -0.34
TCF4-248ENST00000616053 POTECB2RU33 542 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3LB9A6J9 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 IGF2BP3O00425 579 aaKnown RBP eCLIP12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3HP0C7X1 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3GQ6DHY5 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3CQ6IPX1 549 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 KCTD8Q6ZWB6 473 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 HEATR4Q86WZ0 1026 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 TBC1D3Q8IZP1 549 aaPredicted RBP12.96□□□□□ -0.34
TCF4-248ENST00000616053 SETD7Q8WTS6 366 aaKnown RBP12.96□□□□□ -0.34
TCF4-248ENST00000616053 MARCOQ9UEW3 520 aaPredicted RBP12.96□□□□□ -0.34
TCF4-248ENST00000616053 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.34
TCF4-248ENST00000616053 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 ZNF669Q96BR6 464 aaPredicted RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 PUS3Q9BZE2 481 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 UBQLN1Q9UMX0 589 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 TRAV19A0A0A6YYK7 116 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 HPCAL1P37235 193 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 CHN2P52757 468 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 DENND1BQ6P3S1 775 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 GIPC3Q8TF64 312 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 AAR2Q9Y312 384 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 ISM1B1AKI9 464 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 RRM1P23921 792 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 TGFBR2P37173 567 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 OMPP47874 163 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 TSNQ15631 228 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 ATP6AP1LQ52LC2 224 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
TCF4-248ENST00000616053 KCNB2Q92953 911 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 CMTM6Q9NX76 183 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 TRPC5OSA6NMA1 111 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 SLC28A1O00337 649 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 ATP6V1B2P21281 511 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 RAET1GQ6H3X3 334 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 RAB11FIP2Q7L804 512 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 EEF1AKMT1Q8WVE0 214 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 MAT2BQ9NZL9 334 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 GIT1Q9Y2X7 761 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 STAT5AP42229 794 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 EMC2Q15006 297 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 RP9Q8TA86 221 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 HAVCR1Q96D42 359 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.95□□□□□ -0.34
TCF4-248ENST00000616053 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 RHPN2P1A8MT19 583 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 A8MX80 341 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 EXOSC10Q01780 885 aaKnown RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 PIGHQ14442 188 aaPredicted RBP12.95□□□□□ -0.34
TCF4-248ENST00000616053 ARMC3Q5W041 872 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 MYH11P35749 1972 aa12.95□□□□□ -0.34
TCF4-248ENST00000616053 CACNB4O00305 520 aaPredicted RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 SEPT4O43236 478 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms