RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PPP4CP60510 307 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 TRPC3Q13507 836 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 CARTPTQ16568 116 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 NXNQ6DKJ4 435 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 NANOGP8Q6NSW7 305 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 SLC26A11Q86WA9 606 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 TMA16Q96EY4 203 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 PARVBQ9HBI1 364 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 MRPL47Q9HD33 250 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 GPRC5DQ9NZD1 345 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 SORCS3Q9UPU3 1222 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 PABPC1P11940 636 aaKnown RBP10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 XRCC1P18887 633 aaPredicted RBP10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 NME3Q13232 169 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 FSCBQ5H9T9 825 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 DEPDC1Q5TB30 811 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 RCOR2Q8IZ40 523 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 ALDH16A1Q8IZ83 802 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 FAM71DQ8N9W8 422 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 XXYLT1Q8NBI6 393 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 CYP2W1Q8TAV3 490 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 CPT1BQ92523 772 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 SH2D3AQ9BRG2 576 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 CXorf21Q9HAI6 301 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 HESX1Q9UBX0 185 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 ZNHIT2Q9UHR6 403 aa10.69□□□□□ -0.7
TNFAIP3-208ENST00000615468 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 TCF4P15884 667 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 EEF1DP29692 281 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SLC1A6P48664 564 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 NRLP54845 237 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 TCEAL1Q15170 157 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 NEDD8Q15843 81 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 CEP55Q53EZ4 464 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 BNC2Q6ZN30 1099 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 C16orf86Q6ZW13 317 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 FAM156AQ8NDB6 213 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 TFB1MQ8WVM0 346 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 EEF1B2P24534 225 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 HOXA13P31271 388 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 TUFMP49411 452 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PRKG1Q13976 671 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SMTNL2Q2TAL5 461 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 FGD3Q5JSP0 725 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 GALNT18Q6P9A2 607 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PGM2L1Q6PCE3 622 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 KATNAL2Q8IYT4 538 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SIX6OS1Q8N1H7 587 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SLC44A1Q8WWI5 657 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 GBA3Q9H227 469 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 COQ10BQ9H8M1 238 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 CLK4Q9HAZ1 481 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 TOPORSQ9NS56 1045 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SCHIP1Q9P0W5 487 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 AP4S1Q9Y587 144 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SQORQ9Y6N5 450 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 DDX39AO00148 427 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 KLF11O14901 512 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PPP1R11O60927 126 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 DPEP1P16444 411 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 THOP1P52888 689 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 RAB15P59190 212 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PSMC5P62195 406 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 RPS6P62753 249 aaKnown RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 ZNF618Q5T7W0 954 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SNX32Q86XE0 403 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 IGDCC3Q8IVU1 814 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PDZD8Q8NEN9 1154 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SHC3Q92529 594 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 ITPKCQ96DU7 683 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 PRMT6Q96LA8 375 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 C20orf96Q9NUD7 363 aaPredicted RBP10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 SPO11Q9Y5K1 396 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 NOX1Q9Y5S8 564 aa10.68□□□□□ -0.7
TNFAIP3-208ENST00000615468 ZBTB5O15062 677 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 ATE1O95260 518 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 GH2P01242 217 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 PTPN1P18031 435 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 EPHA3P29320 983 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 BAG6P46379 1132 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 GSSP48637 474 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 BMXP51813 675 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 GDF10P55107 478 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 SLC18A2Q05940 514 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 SPOCD1Q6ZMY3 1216 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 MZB1Q8WU39 189 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 PDCD6IPQ8WUM4 868 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 SEMA4DQ92854 862 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 VPS45Q9NRW7 570 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 PNPLA3Q9NST1 481 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 DDX56Q9NY93 547 aaKnown RBP10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 HSPBP1Q9NZL4 362 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
TNFAIP3-208ENST00000615468 ZC3H7BQ9UGR2 993 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms