RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 SPECC1L-ADORA2AF8WAN1 911 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PGRMC1O00264 195 aaKnown RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 KCNK3O14649 394 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ZNF197O14709 1029 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ATP8B1O43520 1251 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PHACTR2O75167 634 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 KIF4AO95239 1232 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 TMEM253P0C7T8 217 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ITGA4P13612 1032 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 TNNI1P19237 187 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 OAS2P29728 719 aaKnown RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 GTF2H1P32780 548 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 VSNL1P62760 191 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PRR20EP86478 221 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PRR20CP86479 221 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PRR20DP86480 221 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PRR20BP86481 221 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PRR20AP86496 221 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 SRSF1Q07955 248 aaKnown RBP eCLIP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PPP3CAQ08209 521 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 FCHO2Q0JRZ9 810 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 LMAN2Q12907 356 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 HNRNPDQ14103 355 aaKnown RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PSMD5Q16401 504 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 SEL1L2Q5TEA6 688 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 SLFN12LQ6IEE8 588 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PKN3Q6P5Z2 889 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 Q6ZNB5 142 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 RHOT2Q8IXI1 618 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 EXOC8Q8IYI6 725 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ZNF295-AS1Q8N0V1 137 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 MEIOBQ8N635 442 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 CSGALNACT1Q8TDX6 532 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ASAP3Q8TDY4 903 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PSPC1Q8WXF1 523 aaKnown RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ADAMTS14Q8WXS8 1223 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ZNF653Q96CK0 615 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ZSWIM3Q96MP5 696 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 CGRRF1Q99675 332 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 AGPAT1Q99943 283 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 C2orf49Q9BVC5 232 aaPredicted RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 C2orf40Q9H1Z8 148 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 TOPORSQ9NS56 1045 aaPredicted RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ZNF446Q9NWS9 450 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 ARHGAP28Q9P2N2 729 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 RNF14Q9UBS8 474 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 AMFRQ9UKV5 643 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 AGO2Q9UKV8 859 aaKnown RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PACSIN2Q9UNF0 486 aaPredicted RBP7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 PIEZO2Q9H5I5 2752 aa7.8□□□□□ -1.16
FAM228B-209ENST00000615135 SF3B1O75533 1304 aaKnown RBP eCLIP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 THADAQ6YHU6 1953 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 ATG2BQ96BY7 2078 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 FAM170AA1A519 330 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CAPN8A6NHC0 703 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 K7ERI5 159 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 DDX3XO00571 662 aaKnown RBP eCLIP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CDK2AP1O14519 115 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 ICMTO60725 284 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 MOSPD3O75425 235 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 TADA2AO75478 443 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 STBD1O95210 358 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 LDHAP00338 332 aaKnown RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 PRKCBP05771 671 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 PRLRP16471 622 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 GLRA2P23416 452 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 MLH1P40692 756 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 VIPR2P41587 438 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CCR2P41597 374 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 SOX9P48436 509 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 SCNN1GP51170 649 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 KPNA1P52294 538 aaPredicted RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 GALCP54803 685 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 FAM193AP78312 1265 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 GABPB1Q06547 395 aaPredicted RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 ENPEPQ07075 957 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CAPSQ13938 189 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 UAP1L1Q3KQV9 507 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 MEI1Q5TIA1 1274 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 PMS2CLQ68D20 193 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 ENOSF1Q7L5Y1 443 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 IRF2BP2Q7Z5L9 587 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 C11orf74Q86VG3 221 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 COG1Q8WTW3 980 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 SLC20A1Q8WUM9 679 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 TCEAL4Q96EI5 215 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 PBKQ96KB5 322 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 MRPL4Q9BYD3 311 aaKnown RBP7.79□□□□□ -1.16
FAM228B-209ENST00000615135 SMARCAL1Q9NZC9 954 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 EHD2Q9NZN4 543 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 CTTNBP2NLQ9P2B4 639 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 RAB21Q9UL25 225 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 SLC8A2Q9UPR5 921 aa7.79□□□□□ -1.16
FAM228B-209ENST00000615135 GIT1Q9Y2X7 761 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms