RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 FLOT2Q14254 428 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 HSDL1Q3SXM5 330 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 SCARA3Q6AZY7 606 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 UNC5BQ8IZJ1 945 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 PLD5Q8N7P1 536 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 ZNF333Q96JL9 665 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 LGMNQ99538 433 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 MIPEPQ99797 713 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 STAP1Q9ULZ2 295 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 DLEC1Q9Y238 1755 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 MAGEB2O15479 319 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 TGM2P21980 687 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 FSTL1Q12841 308 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 USP4Q13107 963 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 KIZQ2M2Z5 673 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 TWNKQ96RR1 684 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 SUDS3Q9H7L9 328 aaPredicted RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 STX18Q9P2W9 335 aaKnown RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 FAF1Q9UNN5 650 aaPredicted RBP12.93□□□□□ -0.34
MSH6-213ENST00000614496 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 CDY2AQ9Y6F7 541 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 CDY1Q9Y6F8 540 aa12.93□□□□□ -0.34
MSH6-213ENST00000614496 NFASCO94856 1347 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 M0QYT0 321 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 EEF2KO00418 725 aaKnown RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 FKBP6O75344 327 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 MAFO75444 373 aaPredicted RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 CSH1P0DML2 217 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 CSH2P0DML3 217 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 SRGAP2BP0DMP2 458 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 INSRRP14616 1297 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 GM2AP17900 193 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 GRIA1P42261 906 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 CMC1Q7Z7K0 106 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 HDAC11Q96DB2 347 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 FAXDC2Q96IV6 333 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 HAPLN2Q9GZV7 340 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 XPNPEP3Q9NQH7 507 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 DCDC2Q9UHG0 476 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 SERPINE1P05121 402 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 CASP2P42575 452 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 ABL2P42684 1182 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 TPD52P55327 224 aaPredicted RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 TPI1P60174 286 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 DEUP1Q05D60 604 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 SLC7A14Q8TBB6 771 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 HTR3CQ8WXA8 447 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 EBNA1BP2Q99848 306 aaKnown RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 MID2Q9UJV3 735 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 APPL1Q9UKG1 709 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 TNRC6CQ9HCJ0 1690 aaKnown RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 PGM3O95394 542 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 NUMBP49757 651 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 PKNOX1P55347 436 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 PPM1JQ5JR12 505 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 ARMCX2Q7L311 632 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 PCDH18Q9HCL0 1135 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■■■■□ 21.4
MSH6-213ENST00000614496 FNDC3AQ9Y2H6 1198 aaKnown RBP12.92□□□□□ -0.34
MSH6-213ENST00000614496 CNTNAP1P78357 1384 aa12.92□□□□□ -0.34
MSH6-213ENST00000614496 RNF103O00237 685 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 TRDMT1O14717 391 aaKnown RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 MT-CO1P00395 513 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 BPGMP07738 259 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 GCAP28676 217 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 TBCCQ15814 346 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 CDHR3Q6ZTQ4 885 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 C1orf127Q8N9H9 656 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 ECSITQ9BQ95 431 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 NRDE2Q9H7Z3 1164 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 IRAK4Q9NWZ3 460 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 HBS1LQ9Y450 684 aaKnown RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 SLC4A1P02730 911 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 GNL1P36915 607 aaPredicted RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 NEK3P51956 506 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 OCRLQ01968 901 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 STILQ15468 1287 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 APOBEC3FQ8IUX4 373 aaKnown RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 C10orf107Q8IVU9 208 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 MPP5Q8N3R9 675 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
MSH6-213ENST00000614496 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 HES2Q9Y543 173 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 DFFAO00273 331 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 CCDC130P13994 396 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 RXRBP28702 533 aa12.91□□□□□ -0.34
MSH6-213ENST00000614496 GSTT1P30711 240 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms